BAC Information

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BAC

Clone NameB6Ng01-247F16
Chromosome16 (Build37)
Map Location 53,564,448 - 53,565,607
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043430, LOC667895
Downstream geneLOC433027, LOC100043442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247F16.bB6Ng01-247F16.g
ACCGA055711GA055712
length1,1431,165
definitionB6Ng01-247F16.b B6Ng01-247F16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacaatagcaatactactgttaagagagctcaactggttgcctat
acaggggctgcttagctgaaagtttctgctccaggctgccaggcataaga
gaagggcttatcaaagagcccactcttgacacttaatcaaggaaagcata
aaaattatgttcattaaaggtttcatgaaagctcaatgggaaactaacaa
tcccaatagcatttaacagtacttaataacatttgacagtgcttaatagt
gattattgtctgacccagtgccccgggaatggctgcatctctctgaactt
tctcacaatccactcaagctatagtggattttactcccttactctatggg
taaatctaggacagaaacatttatttgaaagttcaatattcttaaacggc
ccttattcatagagggcaactatgaataacattttccttttacattattt
tcaatggagaattattctgggtactgatccctaagcaaggaagtacttga
attgtagaaaagtatccttcatagctgtttacacatagtacatagagagg
actgttgtgagttcaaggcttatgttagctatatttgagagagagagact
tagaggatcatgtcctaagtatgtctgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtagaaaaagacagtcttatgattagctaaggagaccctgagca
aacgtggcttaagcccttattgtactctattttaagtgatacctcaaatt
taaaatagtaaggccagcacagtactgacaccaaaccaatcattgtagat
caatagaaccaaaacgtgagtgcacaaactatggttttttaagcaaacaa
aagaaacagagttttctggatacaatagtgaaaatcaaaaatatgactgc
acagtcattgggacaacaggcacaagacttgcacaaattcagccagaaac
aaccctgggagtagcaggagaagctcaccataagctcccatcgctaggtg
agaagcctttggcatttgatgattctagaagagtcaggtccacttttctt
cactatagactttttattatattaggtactatgattatcagttctctctg
ttacaatagagcatcctgaagaccatccaagcattatacattg

gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
ccaaatgctttcactgcattgaatcatcatgtggtttttgtctttgagtt
tgtttatatactggattacgttgatggatttctgtatattgaaccatacc
tgcatccctagaatgaaacctacttggtcaggatggatgattgttttgat
gtgttcttggattcggttagcaagaactttattgaggatttttgcatcaa
tattcataagggacatttgtctgaagttctctatttttgtaggatttttc
tgtggtttaggtatcagagtaattgtgacttcatagaaggagttgggtag
agtaccttctgtttctattttgtggtatagtttgtgaagaactgggatta
gatcttctttgaaggtctaatagaactctgcactaaacccatctggtcct
gggctttttgtggttgggagactattaatgactgcttgtatttctttagg
gaatataggcctgtttagatcattaacctgatcttgatttaactttggta
cctggtatctgtctagatgcttgtccattttatccaggttttccagtttt
gttgagtatagccttttgtagaagaatctgatggtgttctggatttcttc
aaaatctgttgttatgtctcccttttcatttctgattttgttaattagga
tgttttccctgtgccctctagtgagtcaggctaagggtttatctatctta
ttgatttgtcaaagaaccagctcctctttgattaattctttgaatagttc
ctcctgtttccacttgtttgattttgcccctgagtttgattatttcctgc
tatctactcttcttgggtgaatttgcttcctttttttctagagcttttag
gtgtgttttcaagctgctaatgtgtgctctttatagtttccttttggagg
cactcagagctatgagttttcctcttagaatgcttttcattttgtcccat
agtttgggtatgttggtggcttcattttcataactctaaacgtcttaatt
catatcttctgaacaaaggtatcaattgggaaaatgctgttcaggttcac
acgtgaatggtacagtgaactttcctgcataaacagcaagtgacctgggt
gcggcgtgttgagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_53564448_53565607
seq2: B6Ng01-247F16.b_46_1188 (reverse)

seq1  CAATGTATATAATGCCTGTGGAAATTGGTCTTTCAGAAATGCTCTTTATT  50
      |||||  ||||||||   ||||   ||||| |||||  |||||||    |
seq2  CAATG--TATAATGC--TTGGA---TGGTC-TTCAG-GATGCTCT---AT  38

seq1  TGTAA-ACAGAGAACCTTGATTAAAATCATAGGTACCT-ATATAAT-AAA  97
      ||||| | |||||||  ||||   ||||||| |||||| ||||||| |||
seq2  TGTAACAGAGAGAAC--TGAT---AATCATA-GTACCTAATATAATAAAA  82

seq1  AGTCTATAGTTGAAGAAAAGTGACCCTGACTCTTCTAAGGAATCATCAAA  147
      ||||||||| ||||||||||||  |||||||||||||  |||||||||||
seq2  AGTCTATAG-TGAAGAAAAGTGGACCTGACTCTTCTA--GAATCATCAAA  129

seq1  TGCCAAAGGCTTCTCACCTAGCGATGGGAGCTTATGGTGAGCTTCTCCTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAGGCTTCTCACCTAGCGATGGGAGCTTATGGTGAGCTTCTCCTG  179

seq1  CTACT-CCAGGGTTGTTTCTGGCTTGAATTTGTGCAAGTCTTGTGCCTGT  246
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTACTCCCAGGGTTGTTTCTGGC-TGAATTTGTGCAAGTCTTGTGCCTGT  228

seq1  TGTCCCAATGACTGTGCAGTCATATTTTTGA-TTTCACTATTGTATCCAG  295
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTCCCAATGACTGTGCAGTCATATTTTTGATTTTCACTATTGTATCCAG  278

seq1  AAAACTCTGTTTCTTTTGTTTGCTTAAAAAACCATAGTTTGTGCACTCAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTGTTTCTTTTGTTTGCTTAAAAAACCATAGTTTGTGCACTCAC  328

seq1  GTTTTGGTTCTATTGATCTACAATGATTGGTTTGGTGTCAGTACTGTGCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTCTATTGATCTACAATGATTGGTTTGGTGTCAGTACTGTGCT  378

seq1  GGCCTTACTATTTTAAATTTGAGGTATCACTTAAAATAGAGTACAATAAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTACTATTTTAAATTTGAGGTATCACTTAAAATAGAGTACAATAAG  428

seq1  GGCTTAAGCCACGTTTGCTCAGGGTCTCCTTAGCTAATCATAAGACTGTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAAGCCACGTTTGCTCAGGGTCTCCTTAGCTAATCATAAGACTGTC  478

seq1  TTTTTCTACACACACACACACACACACACACACACACACAGACATACTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTACACACACACACACACACACACACACACACACAGACATACTTA  528

seq1  GGACATGATCCTCTAAGTCTCTCTCTCTCAAATATAGCTAACATAAGCCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGATCCTCTAAGTCTCTCTCTCTCAAATATAGCTAACATAAGCCT  578

seq1  TGAACTCACAACAGTCCTCTCTATGTACTATGTGTAAACAGCTATGAAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCACAACAGTCCTCTCTATGTACTATGTGTAAACAGCTATGAAGG  628

seq1  ATACTTTTCTACAATTCAAGTACTTCCTTGCTTAGGGATCAGTACCCAGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTCTACAATTCAAGTACTTCCTTGCTTAGGGATCAGTACCCAGA  678

seq1  ATAATTCTCCATTGAAAATAATGTAAAAGGAAAATGTTATTCATAGTTGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCTCCATTGAAAATAATGTAAAAGGAAAATGTTATTCATAGTTGC  728

seq1  CCTCTATGAATAAGGGCCGTTTAAGAATATTGAACTTTCAAATAAATGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATGAATAAGGGCCGTTTAAGAATATTGAACTTTCAAATAAATGTT  778

seq1  TCTGTCCTAGATTTACCCATAGAGTAAGGGAGTAAAATCCACTATAGCTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTAGATTTACCCATAGAGTAAGGGAGTAAAATCCACTATAGCTT  828

seq1  GAGTGGATTGTGAGAAAGTTCAGAGAGATGCAGCCATTCCCGGGGCACTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGATTGTGAGAAAGTTCAGAGAGATGCAGCCATTCCCGGGGCACTG  878

seq1  GGTCAGACAATAATCACTATTAAGCACTGTCAAATGTTATTAAGTACTGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGACAATAATCACTATTAAGCACTGTCAAATGTTATTAAGTACTGT  928

seq1  TAAATGCTATTGGGATTGTTAGTTTCCCATTGAGCTTTCATGAAACCTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTATTGGGATTGTTAGTTTCCCATTGAGCTTTCATGAAACCTTT  978

seq1  AATGAACATAATTTTTATGCTTTCCTTGATTAAGTGTCAAGAGTGGGCTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACATAATTTTTATGCTTTCCTTGATTAAGTGTCAAGAGTGGGCTC  1028

seq1  TTTGATAAGCCCTTCTCTTATGCCTGGCAGCCTGGAGCAGAAACTTTCAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAAGCCCTTCTCTTATGCCTGGCAGCCTGGAGCAGAAACTTTCAG  1078

seq1  CTAAGCAGCCCCTGTATAGGCAACCAGTTGAGCTCTCTTAACAGTAGTAT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCAGCCCCTGTATAGGCAACCAGTTGAGCTCTCTTAACAGTAGTAT  1128

seq1  TGCTATTGTGAATTC  1160
      |||||||||||||||
seq2  TGCTATTGTGAATTC  1143


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