BAC Information

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BAC

Clone NameB6Ng01-247K09
Chromosome16 (Build37)
Map Location 73,981,261 - 74,109,226
singlet/doubletdoublet
Overlap geneRobo2
Upstream geneRobo1, LOC100039310, LOC100039318, LOC100039326
Downstream geneLOC665042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247K09.bB6Ng01-247K09.g
ACCGA055929GA055930
length2771,098
definitionB6Ng01-247K09.b B6Ng01-247K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,108,950 - 74,109,226)(73,981,261 - 73,982,356)
sequence
atctttggaattctacaggaaatgttaatgcatatagaaaagctatgaca
agtttagattcaatttgaatatatgtaaagatgaactggtttctggcagg
gcatggaggcatgtgcctttaattccagtactcagaggaagagtcaagta
gatctctgtaactttgaggttaattagtctgttttgaatagggcattcca
ggtcacatattaatcccatcttaaatggatgtctgtttgtgtgtgtatgt
gtgtgtgtgtgtgtgtgtgtgtgtgtg

gaattcagatatataggaaagcaaagcaagtctcaccacttaaaagaaaa
aaaagaaagaaagatagaaatagagagagagagagagaaaatctgatagt
ataaagatcaaaggccctgtatctcagaaacttagtcttaagacggggga
aaaaagtcaaaaagaaggaggaaagctcagaaaaatgaaacaaaattaag
attttttaaaaaaatttaagtcattaaaaagtgcagaagaaattcctttt
cacagctcatacactatctaatccctcccacctaagctgtcaagtacaat
aaataaacttctagtaaaaagaaaatcagcagacccttttcaacttccag
cagaagtcaaaattcaaggtacacatgtgcaagcaaaaaataataatttt
agcatcattactcctttagaatgcatttaattaatttatattagtgaagg
tataattaaagttggaagaatgtcataatgtgattagctaacttaaatct
catttctgtctcactgatgatatttaaagatgatattttctactcctcta
gtcagataaaagtattaatatccatcagaatcagtcactccaaggaaata
cttagtgaaaacatagagatcatatttgtaaataggagtgatatcatttg
tttacaataatgcaccccggtaaatttaatgatctaagtagccatcttcg
atgttctttttcttaggggcaatgagtggtatgaaatcagaaagaattag
aaactattaaccattgttgatctatttacgtaaatgtaatatattttcta
atgaaaatgtatatataggcattgaggcaattttttttcgacaaatctag
tattctccccaaacctgaataaaataataaaataataaaaaaaataaata
atatataaaataatgataaaactaattctttttatgaggattatcgagca
atgacatctcaccgtcagtaacttcccaactgtgcttttagctaaatgct
tccctgccacggttaggccctggcagatgtagtaaccccgcatctgaacg
ctgggatgttgttgaatgtgaagtcccccgttgggcgacactggacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_74108950_74109226
seq2: B6Ng01-247K09.b_51_327 (reverse)

seq1  CACACACACACACACACACACACACACACATACACACACAAACAGACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACATACACACACAAACAGACATC  50

seq1  CATTTAAGATGGGATTAATATGTGACCTGGAATGCCCTATTCAAAACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGATGGGATTAATATGTGACCTGGAATGCCCTATTCAAAACAGA  100

seq1  CTAATTAACCTCAAAGTTACAGAGATCTACTTGACTCTTCCTCTGAGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAACCTCAAAGTTACAGAGATCTACTTGACTCTTCCTCTGAGTAC  150

seq1  TGGAATTAAAGGCACATGCCTCCATGCCCTGCCAGAAACCAGTTCATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATTAAAGGCACATGCCTCCATGCCCTGCCAGAAACCAGTTCATCTT  200

seq1  TACATATATTCAAATTGAATCTAAACTTGTCATAGCTTTTCTATATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATTCAAATTGAATCTAAACTTGTCATAGCTTTTCTATATGCAT  250

seq1  TAACATTTCCTGTAGAATTCCAAAGAT  277
      |||||||||||||||||||||||||||
seq2  TAACATTTCCTGTAGAATTCCAAAGAT  277


seq1: chr16_73981261_73982356
seq2: B6Ng01-247K09.g_66_1163

seq1  GAATTCAGATATATAGGAAAGCAAAGCAAGTCTCACCACTTAAAAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATATATAGGAAAGCAAAGCAAGTCTCACCACTTAAAAGAAAA  50

seq1  AAAAGAAAGAAAGATAGAAATAGAGAGAGAGAGAGAGAAAATCTGATAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGAAAGATAGAAATAGAGAGAGAGAGAGAGAAAATCTGATAGT  100

seq1  ATAAAGATCAAAGGCCCTGTATCTCAGAAACTTAGTCTTAAGACGGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGATCAAAGGCCCTGTATCTCAGAAACTTAGTCTTAAGACGGGGGA  150

seq1  AAAAAGTCAAAAAGAAGGAGGAAAGCTCAGAAAAATGAAACAAAATTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGTCAAAAAGAAGGAGGAAAGCTCAGAAAAATGAAACAAAATTAAG  200

seq1  ATTTTTTAAAAAAATTTAAGTCATTAAAAAGTGCAGAAGAAATTCCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAAAAATTTAAGTCATTAAAAAGTGCAGAAGAAATTCCTTTT  250

seq1  CACAGCTCATACACTATCTAATCCCTCCCACCTAAGCTGTCAAGTACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCATACACTATCTAATCCCTCCCACCTAAGCTGTCAAGTACAAT  300

seq1  AAATAAACTTCTAGTAAAAAGAAAATCAGCAGACCCTTTTCAACTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACTTCTAGTAAAAAGAAAATCAGCAGACCCTTTTCAACTTCCAG  350

seq1  CAGAAGTCAAAATTCAAGGTACACATGTGCAAGCAAAAAATAATAATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCAAAATTCAAGGTACACATGTGCAAGCAAAAAATAATAATTTT  400

seq1  AGCATCATTACTCCTTTAGAATGCATTTAATTAATTTATATTAGTGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATTACTCCTTTAGAATGCATTTAATTAATTTATATTAGTGAAGG  450

seq1  TATAATTAAAGTTGGAAGAATGTCATAATGTGATTAGCTAACTTAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAAAGTTGGAAGAATGTCATAATGTGATTAGCTAACTTAAATCT  500

seq1  CATTTCTGTCTCACTGATGATATTTAAAGATGATATTTTCTACTCCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGTCTCACTGATGATATTTAAAGATGATATTTTCTACTCCTCTA  550

seq1  GTCAGATAAAAGTATTAATATCCATCAGAATCAGTCACTCCAAGGAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATAAAAGTATTAATATCCATCAGAATCAGTCACTCCAAGGAAATA  600

seq1  CTTAGTGAAAACATAGAGATCATATTTGTAAATAGGAGTGATATCATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGAAAACATAGAGATCATATTTGTAAATAGGAGTGATATCATTTG  650

seq1  TTTACAATAATGCACCCCGGTAAATTTAATGATCTAAGTAGCCATCTTCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATAATGCACCCCGGTAAATTTAATGATCTAAGTAGCCATCTTCG  700

seq1  ATGTTCTTTTTCTTAGGGGCAATGAGTGGTATGAAATCAGAAAGAATTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTTTTCTTAGGGGCAATGAGTGGTATGAAATCAGAAAGAATTAG  750

seq1  AAACTATTAACCATTGTTGATCTATTTACGTAAATGTAATATATTTTCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTAACCATTGTTGATCTATTTACGTAAATGTAATATATTTTCTA  800

seq1  ATGAAAATGTATATATAGGCATTGAGGCAA-TTTTTTTCGACAAATCTAG  849
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATGAAAATGTATATATAGGCATTGAGGCAATTTTTTTTCGACAAATCTAG  850

seq1  TATTCTCCCCAAACCTGAAATAAAATAATAAAATAATAAAAAAAATAAAA  899
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  TATTCTCCCCAAACCTG-AATAAAATAATAAAATAATAAAAAAAAT-AAA  898

seq1  TAAATAATATAAAATAATGATAAAACTAATTCTTTTTATGAGGATTATCG  949
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAA--TATATAAAATAATGATAAAACTAATTCTTTTTATGAGGATTATCG  946

seq1  AGCAATGACATCTCACCGTCAGTAACTT-CCAACTGTGC-TTTAGCTAAA  997
      |||||||||||||||||||||||||||| |||||||||| ||||||| ||
seq2  AGCAATGACATCTCACCGTCAGTAACTTCCCAACTGTGCTTTTAGCT-AA  995

seq1  ATGCTT-CCTGCCACGGTTAGGGCCTGGCAGATGTAGTAA-CCCGCATCT  1045
      |||||| ||||||||||||||| ||||||||||||||||| |||||||||
seq2  ATGCTTCCCTGCCACGGTTAGGCCCTGGCAGATGTAGTAACCCCGCATCT  1045

seq1  GAACGCT-GGATGTTGGTGATGGTGAGGTCCCCCG-TGGGCGACACTGAA  1093
      ||||||| |||||||| |||  |||| |||||||| |||||||||||| |
seq2  GAACGCTGGGATGTTGTTGAATGTGAAGTCCCCCGTTGGGCGACACTGGA  1095

seq1  CAT  1096
      |||
seq2  CAT  1098


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