BAC Information

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BAC

Clone NameB6Ng01-250O05
Chromosome16 (Build37)
Map Location 15,983,542 - 15,984,675
singlet/doubletsinglet
Overlap gene2310008H04Rik
Upstream geneLOC100042737, LOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd
Downstream geneLOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4, Olfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250O05.bB6Ng01-250O05.g
ACCGA058307GA058308
length1,1241,191
definitionB6Ng01-250O05.b B6Ng01-250O05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttccagtgtttacttgtaaaactgaattcagtcattgtgttt
gtactttggcgtcctgcctgcaattaaaagtacagagcagacttcagtta
gttaccctctatgattttgtgtcctttataaagaggagggagaggagagg
ggaaaacccaagaggtgactgagttcatttacatacagtgccagtgggca
gctgctggctgcctgtggtcacatgattctgtggaggattctgatattcc
acttactggaattgggagtgggacagagaacactcccctttaatacttcc
agttttgtcatagctgaattattacttgcttctatgttattaataaatgc
agatgaaaactttttttggatattttattttttttacatttcaaatatta
tcccctttcccagtttctcctttggaaaccccctgtctcatcctccctcc
tcctacttctatgaggttgctcccacacccacccacccactcttgcctcc
ctgccctggcattcccctacactggagtatccagccttcccaggaccaaa
ggcctctcctgcccattgatgttcaacaaggccagcagatgaaatttagg
atacttccttttccttgttctttttaaactcttgtgtatgtaaaaacgaa
cttctaaaaggagaggttacaggccctgttgtagagcctggtgggcctgt
ctctcagttactttagagggaacacaagcaacggacacaattgattaaag
ttatggggattatctatgggatggacttctcctctctagagtcatagaaa
ccagaaaagtctctgttctttgtagtttgatggttatatgaagatacctg
gcaactactatagaagatggatctgaatggattgttttccagtgcctatg
aaagcaagtcagccctcacaccctaagaggtagtatattgatgatttcct
tgattcaaatttatagcctctggatttggaaaagacgagaaaaggactgg
tcttttgggggcctgttcccagattactattctcacccctaagatgaaga
aggtcagctcagaccctttggaattcccttttccctctgaagagcaggac
gaaggctataggcactctctcctc
gaattcaaacaatcagcaatgacctcccctaaaagggaagccaggcaaca
caataccaatgtccttagggcccaccaatagctgcctgggtacttagaac
caggtttaaggctaagcaggctcctagaggggccatagaaagtgtaatca
ctaaagaggtgtgttatactactaaagggcttaataagtctgatgactca
ttctagcagtttggggctatgtgtagggatagattttaaggatgaaaatt
aatagtggaagaaacataaaacttgatcagactgagttttttgacaggga
cccactcagagaagaatataggtttaacaaaaaacttccttcccacagtt
taaaaacagtatcaaagtttgtttgattggttggctaaagcatttgtcaa
aaaatggccgactgaaaaggagtcttatatcccttggcaaggtgttgatg
aagggaggaatttaaggctcagagaaattaaaggggatacactgtgtaag
ccaaattcttcacaatgggaaggcccagaagacatgtcctttagtgttgc
tttagacacaaaatcatgagagggacccagcacatttaaatagctttgct
cttgccctgttctttgtgccaggccttagtgctgctcagctgaatgagtt
aaatgtggttttaattgggccctggtgcaggggaaacacggagtagcact
gattccacagagacaaggtgggataggtatgctcgtgggcagcacagaca
aagcaacatccaaatggactgaccctggaggagttcatttttcatatccc
attcagaaactaaggccatggaccatttgctattttgtgatggtttgtat
tatgcttggcccagggagtggtagcattaggaagttgtggccttgtggat
aggtgtgtcactgtgggtggtggggcctaatactctcatcctagctgcct
ggaagtcaatcttcccactaggcagcccttcagatggagatgtagaacct
ctttcagctccctgtaccatggcctgtctgggagatgccatatctcccca
cccttgatgataatagacttaaactttcggaacctgtagcctagcccata
atttaattggggctaccagtttgcctttggtctgtgatgtttattcgcgg
cagaaatccttctaaaccttaaaatgaaagctgggaattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15983542_15984675
seq2: B6Ng01-250O05.b_47_1170 (reverse)

seq1  GAGGAGAGAGGTGCCTATAGGCTCTCTGTCCTCGCTCTTCTAGGAGGGGA  50
      ||||||||| |||||||||| || || ||||| |||||||   ||||| |
seq2  GAGGAGAGA-GTGCCTATAGCCT-TC-GTCCT-GCTCTTC--AGAGGGAA  44

seq1  AAGGGGAATTTTCCAAAGGTCCTGAGCTGACC-TCTTCATCTTTAGTGTG  99
      ||||| |   |||||||||  ||||||||||| ||||||||||  | |||
seq2  AAGGGAA---TTCCAAAGGGTCTGAGCTGACCTTCTTCATCTTAGGGGTG  91

seq1  AG-ATAGTAAATTCTGGGAACAGGCCCCC-AAAGACCAGTCCTTTTCTCT  147
      || |||||||  ||||||||||||||||| ||||||||||||||||||| 
seq2  AGAATAGTAA--TCTGGGAACAGGCCCCCAAAAGACCAGTCCTTTTCTC-  138

seq1  GTCTTTTCCAAATCCAGAGGCTATAAATTTGAATCAAGGAAATCATTCAA  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCTTTTCCAAATCCAGAGGCTATAAATTTGAATCAAGGAAATCA-TCAA  187

seq1  TATACTACCTCTTAGGGTGTGAGGGCTGACTTGCTTTCATAGGCACTGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TATACTACCTCTTAGGGTGTGAGGGCTGACTTGCTTTCATAGGCACTGG-  236

seq1  AAAACAATCCATTCAGATCCATCTTCTATAGTAGTTGCCAGGTATCTTCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATCCATTCAGATCCATCTTCTATAGTAGTTGCCAGGTATCTTCA  286

seq1  TATAACCATCAAACTACAAAGAACAGAGACTTTTCTGGTTTCTATGACTC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCATCAAACTACAAAGAACAGAGACTTTTCTGGTTTCTATGACTC  336

seq1  TAGAGAGGAGAAGTCCATCCCATAGATAATCCCCATAACTTTAATCAATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGGAGAAGTCCATCCCATAGATAATCCCCATAACTTTAATCAATT  386

seq1  GTGTCCGTTGCTTGTGTTCCCTCTAAAGTAACTGAGAGACAGGCCCACCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCGTTGCTTGTGTTCCCTCTAAAGTAACTGAGAGACAGGCCCACCA  436

seq1  GGCTCTACAACAGGGCCTGTAACCTCTCCTTTTAGAAGTTCGTTTTTACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTACAACAGGGCCTGTAACCTCTCCTTTTAGAAGTTCGTTTTTACA  486

seq1  TACACAAGAGTTTAAAAAGAACAAGGAAAAGGAAGTATCCTAAATTTCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGAGTTTAAAAAGAACAAGGAAAAGGAAGTATCCTAAATTTCAT  536

seq1  CTGCTGGCCTTGTTGAACATCAATGGG-AGGAGAGGCCTTTGGTCCTGGG  596
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTGCTGGCCTTGTTGAACATCAATGGGCAGGAGAGGCCTTTGGTCCTGGG  586

seq1  AAGGCTGGATACTCCAGTGTAGGGGAATGCCAGGGCAGGGAGGCAAGAGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGATACTCCAGTGTAGGGGAATGCCAGGGCAGGGAGGCAAGAGT  636

seq1  GGGTGGGTGGGTGTGGGAGCAACCTCATAGAAGTAGGAGGAGGGAGGATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGTGGGTGTGGGAGCAACCTCATAGAAGTAGGAGGAGGGAGGATG  686

seq1  AGACAGGGGGTTTCCAAAGGAGAAACTGGGAAAGGGGATAATATTTGAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGGGTTTCCAAAGGAGAAACTGGGAAAGGGGATAATATTTGAAA  736

seq1  TGTAAAAAAAATAAAATATCCAAAAAAAGTTTTCATCTGCATTTATTAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAAAAATAAAATATCCAAAAAAAGTTTTCATCTGCATTTATTAAT  786

seq1  AACATAGAAGCAAGTAATAATTCAGCTATGACAAAACTGGAAGTATTAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGAAGCAAGTAATAATTCAGCTATGACAAAACTGGAAGTATTAAA  836

seq1  GGGGAGTGTTCTCTGTCCCACTCCCAATTCCAGTAAGTGGAATATCAGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTGTTCTCTGTCCCACTCCCAATTCCAGTAAGTGGAATATCAGAA  886

seq1  TCCTCCACAGAATCATGTGACCACAGGCAGCCAGCAGCTGCCCACTGGCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCACAGAATCATGTGACCACAGGCAGCCAGCAGCTGCCCACTGGCA  936

seq1  CTGTATGTAAATGAACTCAGTCACCTCTTGGGTTTTCCCCTCTCCTCTCC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTAAATGAACTCAGTCACCTCTTGGGTTTTCCCCTCTCCTCTCC  986

seq1  CTCCTCTTTATAAAGGACACAAAATCATAGAGGGTAACTAACTGAAGTCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTTTATAAAGGACACAAAATCATAGAGGGTAACTAACTGAAGTCT  1036

seq1  GCTCTGTACTTTTAATTGCAGGCAGGACGCCAAAGTACAAACACAATGAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTACTTTTAATTGCAGGCAGGACGCCAAAGTACAAACACAATGAC  1086

seq1  TGAATTCAGTTTTACAAGTAAACACTGGAACTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCAGTTTTACAAGTAAACACTGGAACTGAATTC  1124