BAC Information

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BAC

Clone NameB6Ng01-258P02
Chromosome16 (Build37)
Map Location 72,194,186 - 72,195,275
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310, LOC100039318
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258P02.bB6Ng01-258P02.g
ACCGA064252GA064253
length1,078801
definitionB6Ng01-258P02.b B6Ng01-258P02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagcagatttaatataaataaaatattctattaaaattacttc
aatgaagttatgatttttgctctcaccgattttgctaaatcaaggagaag
tctcttccaagatttatttcattttaagaaaacaatcagtattaatcctg
agttcaagaacacatctgttcatcagctgctaataataataaactctctt
caaaggggatgtttgataagagaacctcaaagccttcatcataatttgtc
tctgtgtgttgaccctatgtccctcagtggttcagtgacagaggcagtga
tttcaaagcctgaaatgtttctagaatgccagaaattagcatctgattca
ctactctcacagaatggcagcaaattctctaagagagtaaacatgcagga
ttggagcttgaaaaagccatgctaatattcttcaaatgaaccctcatttg
tcctctacaaaaaaaaaaaaaacgacaagtaaaaatcatgattaacattt
gaaggaagctaatttgcataggaagggcagaggtcttcctgatgacacct
aaagaagaaagaaagcacaaaacaaaggcaaagagcacaaaaagtcagca
caaaggccacacctcaagcctgatgcttttgtgctcttcccagagagcat
gacttcactttcactcttgggggtgctttttcatctcttaatacacagtc
tgcttctaacccaagccttctggaatgactttctatctccttggtacagc
taccaggatttcactgtttttcctcctggatgtattaaaattgtccttaa
ggttcacaaaaattcttaatatccattctgtttggtcttataaactggaa
tttaccaatgagtaaaatttaagcacgtacttaatattctgatttgtact
cggttagtatgtccatagctgtaaagttgcagtgtcacagcaagctggtc
agtgctttacctgtccagtcagaaactctggatgtgagatctcactcata
agtcctcagcttcatgagattcatattcagactatgaaaggtcatccttg
cagagattgtcgatcacactaccacaca
gaattcaagaagttagacaccagcagtccaaataacctaattacaaaatg
gggtgcagagctaaacagaactcccaacagaggaatcctaagtggcccag
catcttaaagaaatgtaccagagacctgagaggtgagagactcacagatc
tgaaatagagggaccttaaaggaaatatgctacattggggagatggaacc
tgttgagcgcacctccagtagaaagacggggaatcaagtggagggatggg
gttgccatcccacagtcaaaaactctgactcagagttgttcctgtctgaa
agaactgcagggacaaaagtggagagaagcctgaggaaaagggggtccag
tgactggcccaaaatgggatccagctcagagggacgctccaaggcctgac
actaatactgatgctatggtgtgcttaaaaacaggggcctatcatgactg
ccctccaaaaggcctaacaaaaagctgaaaagtcagatgcagatattttc
acccaaccaatagacagaagctggtgactcctgtgattaaattatggaaa
ggctggaagaagccaaggaggagggtgaccctgtaggaagaccagcagtc
tcaactaacttggactcgcgccatctctcagaaactggaccaccaaacaa
gcagcacacactagctgatatgaggcccccaacacataaacagcaaaaga
ctgccgggtctgaactcaagtcagagaagatgtatctaacccctaagaga
cttggagcccctggggttcgggagatctggtagagtgggagtgggggtgg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72194186_72195275
seq2: B6Ng01-258P02.b_42_1119

seq1  GAATTCACAGCAGATTTAATATAAATAAAATATTCTATTAAAATTACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAGATTTAATATAAATAAAATATTCTATTAAAATTACTTC  50

seq1  AATGAAGTTATGATTTTTGCTCTCACCGATTTTGCTAAATCAAGGAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTTATGATTTTTGCTCTCACCGATTTTGCTAAATCAAGGAGAAG  100

seq1  TCTCTTCCAAGATTTATTTCATTTTAAGAAAACAATCAGTATTAATCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCCAAGATTTATTTCATTTTAAGAAAACAATCAGTATTAATCCTG  150

seq1  AGTTCAAGAACACATCTGTTCATCAGCTGCTAATAATAATAAACTCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGAACACATCTGTTCATCAGCTGCTAATAATAATAAACTCTCTT  200

seq1  CAAAGGGGATGTTTGATAAGAGAACCTCAAAGCCTTCATCATAATTTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGGATGTTTGATAAGAGAACCTCAAAGCCTTCATCATAATTTGTC  250

seq1  TCTGTGTGTTGACCCTATGTCCCTCAGTGGTTCAGTGACAGAGGCAGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTTGACCCTATGTCCCTCAGTGGTTCAGTGACAGAGGCAGTGA  300

seq1  TTTCAAAGCCTGAAATGTTTCTAGAATGCCAGAAATTAGCATCTGATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGCCTGAAATGTTTCTAGAATGCCAGAAATTAGCATCTGATTCA  350

seq1  CTACTCTCACAGAATGGCAGCAAATTCTCTAAGAGAGTAAACATGCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTCACAGAATGGCAGCAAATTCTCTAAGAGAGTAAACATGCAGGA  400

seq1  TTGGAGCTTGAAAAAGCCATGCTAATATTCTTCAAATGAACCCTCATTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCTTGAAAAAGCCATGCTAATATTCTTCAAATGAACCCTCATTTG  450

seq1  TCCTCTACAAAAAAAAAAAAAACGACAAGTAAAAATCATGATTAACATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTACAAAAAAAAAAAAAACGACAAGTAAAAATCATGATTAACATTT  500

seq1  GAAGGAAGCTAATTTGCATAGGAAGGGCAGAGGTCTTCCTGATGACACCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGCTAATTTGCATAGGAAGGGCAGAGGTCTTCCTGATGACACCT  550

seq1  AAAGAAGAAAGAAAGCACAAAACAAAGGCAAAGAGCACAAAAAGTCAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAAAGAAAGCACAAAACAAAGGCAAAGAGCACAAAAAGTCAGCA  600

seq1  CAAAGGCCACACCTCAAGCCTGATGCTTTTGTGCTCTTCCCAGAGAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCACACCTCAAGCCTGATGCTTTTGTGCTCTTCCCAGAGAGCAT  650

seq1  GACTTCACTTTCACTCTTGGGGGTGCTTTTTCATCTCTTAATACACAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCACTTTCACTCTTGGGGGTGCTTTTTCATCTCTTAATACACAGTC  700

seq1  TGCTTCTAACCCAAGCCTTCTGGAATGACTTTCTATCTCCTTGGTACAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTAACCCAAGCCTTCTGGAATGACTTTCTATCTCCTTGGTACAGC  750

seq1  TACCAGGATTTCACTGTTTTTCCTCCTGGATGTATTAAAATTGTCCTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGGATTTCACTGTTTTTCCTCCTGGATGTATTAAAATTGTCCTTAA  800

seq1  GGTTCACAAAAATTCTTAATATCCATTCTGTTTGGTCTTATAAACTGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCACAAAAATTCTTAATATCCATTCTGTTTGGTCTTATAAACTGGAA  850

seq1  TTTACCAATGAGTAAAATTTAAAGCACGTACTTAATATTCTGATTTGTAC  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTACCAATGAGTAAAATTT-AAGCACGTACTTAATATTCTGATTTGTAC  899

seq1  TCGGTTAGTATGTCCATAGCTGTAAAGTTGCAGTGTCACAGCAAGCTGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTAGTATGTCCATAGCTGTAAAGTTGCAGTGTCACAGCAAGCTGGT  949

seq1  CAGTGCTTTACCTGTCCAGTCAGAAACTCTGGATGTGAGGAATCTCACTC  1000
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  CAGTGCTTTACCTGTCCAGTCAGAAACTCTGGATGTGAG--ATCTCACTC  997

seq1  ATAAGTCCTCAGCTTCAATGAGATTTCCATATTTCAGACCTATGGAAAGG  1050
      |||||||||||||||| ||||||||  |||| |||||| |||| ||||||
seq2  ATAAGTCCTCAGCTTC-ATGAGATT--CATA-TTCAGA-CTAT-GAAAGG  1041

seq1  GCCATTCCCTGCAGAGAATTTGTCGAT-ACACACACACACA  1090
       |   ||| ||||||||  |||||||| ||||   ||||||
seq2  TC--ATCCTTGCAGAGA--TTGTCGATCACACTACCACACA  1078