BAC Information

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BAC

Clone NameB6Ng01-263E10
Chromosome16 (Build37)
Map Location 6,557,822 - 6,558,993
singlet/doubletsinglet
Overlap geneA2bp1
Upstream geneLOC100042436, LOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263E10.bB6Ng01-263E10.g
ACCGA067486GA067487
length1,1921,167
definitionB6Ng01-263E10.b B6Ng01-263E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtataccattttttaatggggttatttgatt
ttctggagtccaccttgttgagttctttatatatatattggatattagcc
acctatcagatttaggattggtaaatcttttcccaatctgttggtggcct
ttttgtcttattgacagtgtcctttgccatacagaagctttacaatttta
tgaggttacatttgccaattcttgatcttatagcacaagtcagtgctgtt
ctgttcaggaacttttctcctgtgcctatatctttgatatgtttccccac
tttctcctctataagtttcagtgtctctggttttatgtagagttccttga
tccacttagacttgagctttgtacaaggagataagaatggatcaattcac
attcttctacatgataactgccagttaagccagcatgatatgttgaacgt
gctgtcttctttccactggatggttttagctcctttgtcaaagatcaagt
gaccataggtatgtgggttcatttctgggtcttcaattccattctattga
tctacctgtcattcactgtttcagtaccatgcagtttttctcacaattta
gtacagcttgaggtcagggattgcaccagaggttcttttattgttgtgaa
tggtttttgctatcctaggttttttgttattctagatgaatttgcaaatt
gccctttctaactcagtgaagaattgagttggaattttgatggagattgc
tttgaatctgtagattgcttttggcaagatagccatttttactatattaa
tcctgccaatccatgagcatgggagatatttccatcttctgagatcttct
tcaatttctttcttcagagacttgaagttcttatcacacagatctttcac
ttccttagttagagttacgccaaagtattttatgttacttgtgactattt
tgaaagggtgtttcccttatttctttctcagctatttatcctttgtgtag
agaaggcactgctttgtttgagtattttttatcagctactcatgaagttg
ttatcagatttagagtctctggtgaatttttgagtcactaaattactatc
aattcatctgcataggaatattggactctcccttcaattgatccttgact
tcttgtgtgactaactgctccggcataagactttttgttgat

gaattccatttccccacaaagctaaaacccatatcctaggagtccccatg
ccacataaaggtgcctgaatagctgtgataggtagagaaaaaaccatgga
tggggatcagagaccttgcactctgaagacagacagataggagataaagc
aagctggaatgggaacattagttacataattcacaggccctcctcctgtg
actacttggaataagcagatggctgaagaatgagcatcttctattttccc
tttcttgcttcagtttttggaatgtgtttatttccctagatgaattacac
aggtggattaactcatttctggaagagattgagggaggcatcagtgtggc
tctctaggcattttctgacctagtcgaaatggaataagttcttcttcaag
ttattttaacttcagaatgcaacagtaacaatcatagctcttgtctgcaa
tgatgatacgaaaaacaatgagtgcagaaagccagcttgtgattgacacc
tcactgatgtgtaggccagatgtggcatatttcattcttgcacagtgggt
tccagatgccgaagataaaaagatgtgtcaagtggaatatttacaagtct
gaaacaatagactctaagtgcaagtatgtatttattaaggagtgctgtaa
tcaattagtaatgtctgttctggctgaggcattaaaaatagttacccaga
ttatatttcaactagtagactcctttcatttttgcactgtttttttccta
aatagaacacataataaattatattagaaatgggatagcctataagacct
tagtattattaaaaatatttgttaggtaaaaacagtaagagaattttgag
cagtacaaagaaaaagtgctacataaattcaaattcttgatgtacatata
gtgatgtctctctacaacaataaaattcaaatacttattacagttattag
tggattttattttctcttttaataattggaaaatatattagatatatctg
tgcttctgctagatagataacagagcttgacttagtgtctcacaataaca
gtatgtacataacacatggaaaggtagttcacaatagcattatagtgtgt
tagtgttctgaccacatagcagagtgagtgaatctagaattttctgcttg
ttctggtctatgtgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_6557822_6558993
seq2: B6Ng01-263E10.g_67_1233

seq1  GAATTCCATTTCCCCACAAAGCTAAAACCCATATCCTAGGAGTCCCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTCCCCACAAAGCTAAAACCCATATCCTAGGAGTCCCCATG  50

seq1  CCACATAAAGGTGCCTGAATAGCTGTGATAGGTAGAGAAAAAACCATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAAAGGTGCCTGAATAGCTGTGATAGGTAGAGAAAAAACCATGGA  100

seq1  TGGGGATCAGAGACCTTGCACTCTGAAGACAGACAGATAGGAGATAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCAGAGACCTTGCACTCTGAAGACAGACAGATAGGAGATAAAGC  150

seq1  AAGCTGGAATGGGAACATTAGTTACATAATTCACAGGCCCTCCTCCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGAATGGGAACATTAGTTACATAATTCACAGGCCCTCCTCCTGTG  200

seq1  ACTACTTGGAATAAGCAGATGGCTGAAGAATGAGCATCTTCTATTTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTGGAATAAGCAGATGGCTGAAGAATGAGCATCTTCTATTTTCCC  250

seq1  TTTCTTGCTTCAGTTTTTGGAATGTGTTTATTTCCCTAGATGAATTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGCTTCAGTTTTTGGAATGTGTTTATTTCCCTAGATGAATTACAC  300

seq1  AGGTGGATTAACTCATTTCTGGAAGAGATTGAGGGAGGCATCAGTGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATTAACTCATTTCTGGAAGAGATTGAGGGAGGCATCAGTGTGGC  350

seq1  TCTCTAGGCATTTTCTGACCTAGTCGAAATGGAATAAGTTCTTCTTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGGCATTTTCTGACCTAGTCGAAATGGAATAAGTTCTTCTTCAAG  400

seq1  TTATTTTAACTTCAGAATGCAACAGTAACAATCATAGCTCTTGTCTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAACTTCAGAATGCAACAGTAACAATCATAGCTCTTGTCTGCAA  450

seq1  TGATGATACGAAAAACAATGAGTGCAGAAAGCCAGCTTGTGATTGACACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGATACGAAAAACAATGAGTGCAGAAAGCCAGCTTGTGATTGACACC  500

seq1  TCACTGATGTGTAGGCCAGATGTGGCATATTTCATTCTTGCACAGTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATGTGTAGGCCAGATGTGGCATATTTCATTCTTGCACAGTGGGT  550

seq1  TCCAGATGCCGAAGATAAAAAGATGTGTCAAGTGGAATATTTACAAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATGCCGAAGATAAAAAGATGTGTCAAGTGGAATATTTACAAGTCT  600

seq1  GAAACAATAGACTCTAAGTGCAAGTATGTATTTATTAAGGAGTGCTGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATAGACTCTAAGTGCAAGTATGTATTTATTAAGGAGTGCTGTAA  650

seq1  TCAATTAGTAATGTCTGTTCTGGCTGAGGCATTAAAAATAGTTACCCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAGTAATGTCTGTTCTGGCTGAGGCATTAAAAATAGTTACCCAGA  700

seq1  TTATATTTCAACTAGTAGACTCCTTTCATTTTTGCACTGTTTTTTTCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTCAACTAGTAGACTCCTTTCATTTTTGCACTGTTTTTTTCCTA  750

seq1  AATAGAACACATAATAAATTATATTAGAAATGGGATAGCCTATAAGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAACACATAATAAATTATATTAGAAATGGGATAGCCTATAAGACCT  800

seq1  TAGTATTATTAAAAATATTTGTTAGGTAAAAACAGTAAGAGAATTTTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTATTAAAAATATTTGTTAGGTAAAAACAGTAAGAGAATTTTGAG  850

seq1  CAGTACAAAGAAAAAGTGCTACATAAATTCAAATTCTTGATGTACATATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACAAAGAAAAAGTGCTACATAAATTCAAATTCTTGATGTACATATA  900

seq1  GTGATGTCTCTCTACAACAATAAAATTCAAATACTTATTACAGTTATTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTCTCTCTACAACAATAAAATTCAAATACTTATTACAGTTATTAG  950

seq1  TGGATTTTATTTTCTCTTTTAATAATTGGAAAATATATTAGATATATCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTATTTTCTCTTTTAATAATTGGAAAATATATTAGATATATCTG  1000

seq1  TGCTTCTGGCTAAGATAGAATAACAGAGCTTGACTTAGTGTCTCACATAA  1050
      ||||||| ||| |||||| ||||||||||||||||||||||||||||  |
seq2  TGCTTCT-GCT-AGATAG-ATAACAGAGCTTGACTTAGTGTCTCACAATA  1047

seq1  CCAGGTAATGTACATAACACATGGAAAGGTAGTCCAC-ATAGCATTATAG  1099
       |||   |||||||||||||||||||||||||| ||| ||||||||||||
seq2  ACAG--TATGTACATAACACATGGAAAGGTAGTTCACAATAGCATTATAG  1095

seq1  TGTG-TAGTGTTCCTGACCACATAGGCAGAAGTGAGTG-ATCTAGA--TT  1145
      |||| ||||||| ||||||||||| |||| |||||||| |||||||  ||
seq2  TGTGTTAGTGTT-CTGACCACATA-GCAG-AGTGAGTGAATCTAGAATTT  1142

seq1  TCTGCTTTGTCTGGAGTCTATGTGATT  1172
      |||||||  ||||  ||||||||||||
seq2  TCTGCTTGTTCTG--GTCTATGTGATT  1167


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