BAC Information

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BAC

Clone NameB6Ng01-270H09
Chromosome16 (Build37)
Map Location 61,450,675 - 61,451,783
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, EG668168, LOC668170, LOC100043524, LOC668183
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270H09.bB6Ng01-270H09.g
ACCGA072793GA072794
length1,1151,092
definitionB6Ng01-270H09.b B6Ng01-270H09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagtttagatttataccccatcttttgattgggttgtttggtt
ttttttggtggttagcttcttgagttctttgaatattctttgaatattat
tattagccctctatcaatgaggagttagtgaagtcccccccccccaattt
gtaggttgccggatttgtcttattgactagattttaccttacacctatca
gaatgcctaagatcaaaatctgaagtgacaacacacattggagagaatgt
ggaaaaagagcatcactcctccattgctggtgaaattggaaagtggtaca
accactctggaaatcaatctggaggttcctcagaaaattggaaatcgatc
tgtcagaagacccagcaacaaccagatgttccatgacagaagaatgaata
cagaaaatgtggtttatttacataatagaatactgttcagctattaggaa
tgaagacatcttgagttttgcaggcaaatggatggaagtagaaaatatca
tcctgagtgagataactcagacctaaaaggatatgcatggtatgtactca
gtaataagtggagattagccacaaaaagtacagaataaccaagataccaa
ccatagaactcaaaaagctcaactagctgaagtgtccaagtgagaactcc
tcagtcccactttggagggagaagaaagaaatcacaagtggggagagatg
gagagagggacctgggagggatagtagacaggagggaggagatagagggg
aacctgatctggtattgagtgagggaaaaggactgaagtcctgaggccag
cataaagcattaaaacaggcaactttgggaggtaggaagttggcggaacc
ttgtagaaatgcaccatagacctgtaagtgagagactctcaggactcaag
ggaggactttcatgaaaatcctgtcgcagggagagaaacttgagagtcca
ccccccacaggaatcacttaccccagatgaggacgacgctggccatccct
ccttgcaaactactgactcatgcatcttctgctgactgcaagtaactggc
agggattgaatgcgtgaggaaacattagggaattcgaaggccacagtaac
gctcctaattggcga
gaattcctagcttttatactccttcccccatttcttctatgatctctgac
ccccacagaagaggtgtgatataaatgttgcatctattgttaagtactcc
acagggacttagtctctttattttgaacagatgtgagtgtctttgataac
caatatccaatgcacatgatgaggcctgtggactgcattaatgtatatgt
ataaaaatgcttatttagagggtaattttattttacgtccattagcaaaa
tagtggtaatagtttcattctggggtctttgctagcccaatcatggattt
tgcaaaaaaaaaaaaaatacattaacaaactatggttccttgtatagggt
gggccttgcttaaacctcggtacagacagaagatattcttatcggtttag
gtcatgtgttattataacttttggtacacaagtaagagcagtggcagtac
cctatgttatttcagtgttccctgagaactatctattgaacaacacaaag
gaatatattatatacctgacattggtaattttctttttctttataatttt
tattagatattctcttcatttacatttaaaatgctatctcctttccttgt
ttcctctctgaaagtcccctatacaccccccaccccctgccctgttcccc
aacccatccactccttcttcatggccctggcattcccctgtactgggata
tattatcttcacaaaaccaagggactctcctccctttgatggctgactag
gccatcctctgctatatatgcagttagagacgtagcagccaatgtgttct
aattcaatctttgttcctccttttaggtgaatctatttaaaaattttaga
cacattcctattgagctattacagacagctgttttcatatggctacttca
aatacttttaatattaattatactctacctacttcctcatccataaaact
cagaacaaaagacttgaacaaatgctttctaataataaaaataaattctt
agttggaaaggatagattacttaaaatatcagtcatatcagtgtcaaatt
aataataacatttttctacgaaataaaagaaatatgttctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61450675_61451783
seq2: B6Ng01-270H09.g_65_1156

seq1  GAATTCCTAGCTTTTATACTCCTTCCCCCATTTCTTCTATGATCTCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGCTTTTATACTCCTTCCCCCATTTCTTCTATGATCTCTGAC  50

seq1  CCCCACAGAAGAGGTGTGATATAAATGTTGCATCTATTGTTAAGTACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGAAGAGGTGTGATATAAATGTTGCATCTATTGTTAAGTACTCC  100

seq1  ACAGGGACTTAGTCTCTTTATTTTGAACAGATGTGAGTGTCTTTGATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGACTTAGTCTCTTTATTTTGAACAGATGTGAGTGTCTTTGATAAC  150

seq1  CAATATCCAATGCACATGATGAGGCCTGTGGACTGCATTAATGTATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCCAATGCACATGATGAGGCCTGTGGACTGCATTAATGTATATGT  200

seq1  ATAAAAATGCTTATTTAGAGGGTAATTTTATTTTACGTCCATTAGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGCTTATTTAGAGGGTAATTTTATTTTACGTCCATTAGCAAAA  250

seq1  TAGTGGTAATAGTTTCATTCTGGGGTCTTTGCTAGCCCAATCATGGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTAATAGTTTCATTCTGGGGTCTTTGCTAGCCCAATCATGGATTT  300

seq1  TGCAAAAAAAAAAAAAATACATTAACAAACTATGGTTCCTTGTATAGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAAAAAAAAATACATTAACAAACTATGGTTCCTTGTATAGGGT  350

seq1  GGGCCTTGCTTAAACCTCGGTACAGACAGAAGATATTCTTATCGGTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGCTTAAACCTCGGTACAGACAGAAGATATTCTTATCGGTTTAG  400

seq1  GTCATGTGTTATTATAACTTTTGGTACACAAGTAAGAGCAGTGGCAGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGTGTTATTATAACTTTTGGTACACAAGTAAGAGCAGTGGCAGTAC  450

seq1  CCTATGTTATTTCAGTGTTCCCTGAGAACTATCTATTGAACAACACAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGTTATTTCAGTGTTCCCTGAGAACTATCTATTGAACAACACAAAG  500

seq1  GAATATATTATATACCTGACATTGGTAATTTTCTTTTTCTTTATAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATTATATACCTGACATTGGTAATTTTCTTTTTCTTTATAATTTT  550

seq1  TATTAGATATTCTCTTCATTTACATTTAAAATGCTATCTCCTTTCCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATATTCTCTTCATTTACATTTAAAATGCTATCTCCTTTCCTTGT  600

seq1  TTCCTCTCTGAAAGTCCCCTATACACCCCCCACCCCCTGCCCTGTTCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCTGAAAGTCCCCTATACACCCCCCACCCCCTGCCCTGTTCCCC  650

seq1  AACCCATCCACTCCTTCTTCATGGCCCTGGCATTCCCCTGTACTGGGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATCCACTCCTTCTTCATGGCCCTGGCATTCCCCTGTACTGGGATA  700

seq1  TATTATCTTCACAAAACCAAGGGACTCTCCTCCCTTTGATGGCTGACTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTTCACAAAACCAAGGGACTCTCCTCCCTTTGATGGCTGACTAG  750

seq1  GCCATCCTCTGCTATATATGCAGTTAGAGACGTAGCAGCCAATGTGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCTCTGCTATATATGCAGTTAGAGACGTAGCAGCCAATGTGTTCT  800

seq1  AATTCAATCTTTGTTCCTCCTTTTAGGTGAATCTATTTAAAAATTTTAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAATCTTTGTTCCTCCTTTTAGGTGAATCTATTTAAAAATTTTAGA  850

seq1  CACATTCCTATTGAGCTATTACAGACAGCTGTTTTCATATGGCTACTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCCTATTGAGCTATTACAGACAGCTGTTTTCATATGGCTACTTCA  900

seq1  AATACTTTTAATATTAATTATACTCTACCTACTTCCTCATCCATAAAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTTTAATATTAATTATACTCTACCTACTTCCTCATCCATAAAACT  950

seq1  CAGAACAAAAGACTTGAACAAATGCTTTCTAATA--TAAAATAAATTCTT  998
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  CAGAACAAAAGACTTGAACAAATGCTTTCTAATAATAAAAATAAATTCTT  1000

seq1  AGTTGGAAAGGAATAGAATTAACCTTAAAAATATCAAGGTTCATATCAAG  1048
      ||||||||||| |||| ||||  ||| |||||||||    ||||||| ||
seq2  AGTTGGAAAGG-ATAG-ATTA--CTT-AAAATATCA---GTCATATC-AG  1041

seq1  TGTCCAAAATTTAATAAT-ACATTTTTCTTTAAGGGAAAATAAAAGAAAA  1097
      ||||   || |||||||| ||||||||||   | |  |||||||||||  
seq2  TGTC---AAATTAATAATAACATTTTTCT---ACG--AAATAAAAGAA--  1081

seq1  TAAATGTTCTAT  1109
       | |||||||||
seq2  -ATATGTTCTAT  1092