BAC Information

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BAC

Clone NameB6Ng01-273C10
Chromosome16 (Build37)
Map Location 54,623,760 - 54,624,866
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433027, LOC100043442
Downstream geneLOC100043449, LOC667927, LOC436421, Zpld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273C10.bB6Ng01-273C10.g
ACCGA074795GA074796
length1,100332
definitionB6Ng01-273C10.b B6Ng01-273C10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgagttttattcacacttattacttgcttaacaaattttca
tgctgtttctcatctctcattttaaattaacaattaggccctcattgatt
caataggtatgttttttaaatgctgcacaactgtgcacaatttatgttga
taaaaccagcaaaaatatttattacttttctttcagtatatttttgttcc
caaggaaattaaatatttgccatgtgtaatgtacagactaggaaaatact
atattttgttaagttctacagtaatacatggaaaaaaaaagtaattcata
tgactatgtagtagaattttccctattctactcatagatccctaacagga
aacaaagtaatacatcttcataggtaatgagacatgagaagagtttgtgg
ggacaggaggcattgtcataccaaactgatagcagcttggtagcatagtt
aatatgtatttagcatacatgtacatgtccagaagtaagaagtctgaagt
ggatatcagaaggttcaggtgaagggttcaaagggtttgacttctatgag
cttcagtagcaaatctgtgaccttggcaggcccaatttctggacatctgc
agcccttgtcttgtgcccacattcttcattttcaaaatcagaaaatgttt
taatgttttggttttgacacgctcttgtcttttttaaaaaaaaaaaaatt
gattattttgtttatttacatttcgaatgttaacccccttcctggtttct
tctttgagagcccaccatctcacctcttccccctgccaccacgagggagc
tccctcacccgcatacccactcccacccaatctccatagcattcccctaa
actggggcatcaagaagtcacaggaccaaagggccccccatcattttgat
gccagacagaccatcctctcctacatatgcaactgaagaacatgggtccc
ctccatgtgtatcctttggtggtgggtggtggtcccttgggagctcagcc
tgtgtgtagggtgcagatcaaaagggcctggttgatactgttgttctcca
tggatgccaacctctcagctcctgtgccctggtagcaaggtcccgtctgt


tatgacaacccctacattcacccaaccaactttcccccaaaataatagcc
tagaaagaaagccatcaagctattggttgggtcacacggcccccaatgga
ggagctagagaaattacccaaggagctaatgggaactgcaaccctatagg
tggaacaacaatatcaactaaccagtaccccggagctcttgtctctagct
gcatatgtatcaaaagatggcctagtcggccatcactgaaaagagaggcc
cattggacttgcaaactttatatgccccagtacaggggaacgccagggcc
aaaaagggggaatgggtgggtaggggattggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_54623760_54624866
seq2: B6Ng01-273C10.b_50_1149

seq1  GAATTCTTATGAGTTTTATTCACACTTATTACTTGCTTAACAAATTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAGTTTTATTCACACTTATTACTTGCTTAACAAATTTTCA  50

seq1  TGCTGTTTCTCATCTCTCATTTTAAATTAACAATTAGGCCCTCATTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTCTCATCTCTCATTTTAAATTAACAATTAGGCCCTCATTGATT  100

seq1  CAATAGGTATGTTTTTTAAATGCTGCACAACTGTGCACAATTTATGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGGTATGTTTTTTAAATGCTGCACAACTGTGCACAATTTATGTTGA  150

seq1  TAAAACCAGCAAAAATATTTATTACTTTTCTTTCAGTATATTTTTGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAGCAAAAATATTTATTACTTTTCTTTCAGTATATTTTTGTTCC  200

seq1  CAAGGAAATTAAATATTTGCCATGTGTAATGTACAGACTAGGAAAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAATTAAATATTTGCCATGTGTAATGTACAGACTAGGAAAATACT  250

seq1  ATATTTTGTTAAGTTCTACAGTAATACATGGAAAAAAAAAGTAATTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGTTAAGTTCTACAGTAATACATGGAAAAAAAAAGTAATTCATA  300

seq1  TGACTATGTAGTAGAATTTTCCCTATTCTACTCATAGATCCCTAACAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATGTAGTAGAATTTTCCCTATTCTACTCATAGATCCCTAACAGGA  350

seq1  AACAAAGTAATACATCTTCATAGGTAATGAGACATGAGAAGAGTTTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTAATACATCTTCATAGGTAATGAGACATGAGAAGAGTTTGTGG  400

seq1  GGACAGGAGGCATTGTCATACCAAACTGATAGCAGCTTGGTAGCATAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGAGGCATTGTCATACCAAACTGATAGCAGCTTGGTAGCATAGTT  450

seq1  AATATGTATTTAGCATACATGTACATGTCCAGAAGTAAGAAGTCTGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTATTTAGCATACATGTACATGTCCAGAAGTAAGAAGTCTGAAGT  500

seq1  GGATATCAGAAGGTTCAGGTGAAGGGTTCAAAGGGTTTGACTTCTATGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCAGAAGGTTCAGGTGAAGGGTTCAAAGGGTTTGACTTCTATGAG  550

seq1  CTTCAGTAGCAAATCTGTGACCTTGGCAGGCCCAATTTCTGGACATCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTAGCAAATCTGTGACCTTGGCAGGCCCAATTTCTGGACATCTGC  600

seq1  AGCCCTTGTCTTGTGCCCACATTCTTCATTTTCAAAATCAGAAAATGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGTCTTGTGCCCACATTCTTCATTTTCAAAATCAGAAAATGTTT  650

seq1  TAATGTTTTGGTTTTGACACGCTCTTGTCTTTTTTAAAAAAAAAAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTTGGTTTTGACACGCTCTTGTCTTTTTTAAAAAAAAAAAAATT  700

seq1  GATTATTTTGTTTATTTACATTTCGAATGTTAACCCCCTTCCTGGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTTGTTTATTTACATTTCGAATGTTAACCCCCTTCCTGGTTTCT  750

seq1  TCTTTGAGAGCCCACCATCTCACCTCTTCCCCCTGCCACCACGAGGGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAGAGCCCACCATCTCACCTCTTCCCCCTGCCACCACGAGGGAGC  800

seq1  TCCCTCACCCGCATACCCACTCCCACCCAATCTCCATAGCATTCCCCTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCACCCGCATACCCACTCCCACCCAATCTCCATAGCATTCCCCTAA  850

seq1  ACTGGGGCATCAAGAAGTCACAGGACC-AAGGGCCCCCCATCATTTTGAT  899
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTGGGGCATCAAGAAGTCACAGGACCAAAGGGCCCCCCATCATTTTGAT  900

seq1  GCCAGACAAGACCATCCTCTCCTACATATGCAACTGAAG-ACATGGGT-C  947
      ||||||| ||||||||||||||||||||||||||||||| |||||||| |
seq2  GCCAGAC-AGACCATCCTCTCCTACATATGCAACTGAAGAACATGGGTCC  949

seq1  CCTCCATGTGTATTCTTTGGTTGGTGGT-GTGGTCCC-TGGGAGCTCAGG  995
      ||||||||||||| ||||||| |  ||| |||||||| |||||||||| |
seq2  CCTCCATGTGTATCCTTTGGTGGTGGGTGGTGGTCCCTTGGGAGCTCA-G  998

seq1  CGTGTGTGTTAGGGTGCAGATCAAAAGGGCTTGGTTGATACTGTTGTTCT  1045
      | |||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGTGTG-TAGGGTGCAGATCAAAAGGGCCTGGTTGATACTGTTGTTCT  1047

seq1  TCCTATGGGATTGCAAACCTCTTCAGCTCCTGTTGGCCCCTGGTAGCCAG  1095
        | ||||   ||| |||||| |||||||||||    |||||||||| ||
seq2  --CCATGG--ATGCCAACCTC-TCAGCTCCTGT---GCCCTGGTAGCAAG  1089

seq1  GTCCCTGTCTGT  1107
      ||||| ||||||
seq2  GTCCC-GTCTGT  1100


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