BAC Information

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BAC

Clone NameB6Ng01-273N11
Chromosome16 (Build37)
Map Location 15,288,388 - 15,289,573
singlet/doubletsinglet
Overlap genenone
Upstream geneMyh11, 0610037P05Rik, Abcc1, Gm1758, Snai2, Efcab1, LOC100042737, LOC665653, LOC385748
Downstream geneLOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273N11.bB6Ng01-273N11.g
ACCGA075305GA075306
length1,1621,160
definitionB6Ng01-273N11.b B6Ng01-273N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccagtccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
caggatctttcactttcctttagttagagtcacgccgaggatattttata
ttatttgtgacttattgagaagggtgttgttttccctaattttctttctc
agcctgtttatttctttgtgtaagagaaaggccatttgacttgttggagt
aatttttataatcagcttactttcacggagctctgttttattcaaggttt
aggagttctctggtggattttaaggttcatcttaataatactattccata
ctattctgcgca
gaattcctaggttttgaaggtttactcaggttaacagaacctaacttaag
aatgcatgtctaaataattagttgtctgctaactctgttcaacaccctgc
ttctagaaaaatttaaataaggaacaccataggtatatttgataaataac
atttataaattcctaaggtctactgaagtctacagtaatcattgtttagc
ctctttgtctttcctcacgttgttaagccttagctatttcagtaaactga
atcatacaagaagctgatattctataatggtatactataaaaaaaagatc
agttaagttcctaatctctctataaattatatttattatttaaagttttt
aaggcatttatttatgctttaaagtttaattttaatgttaaaggatcttc
aattaaattttcaactcattttaagggaaaaagctataacaccctaatct
tataaaaactattaatttgcaaagtattgcctaattcatttagtaatgaa
ctttatttagcctctggtgtgtgttctcaaggttaagcctaaaatcacgt
atacttaatagatacatggtcctcaaattcttcagagattttctgaatat
atcatttaaaatgtttaatgtggtaataatagacagaaatatcagttctt
agagatatctctaaggtcttgaaagaaaacaatgtggaggggggcaccaa
ctaccccacatggattatggttacactaaccactggggaaaactgtccca
tagtttacctgctatcaaggctccgcacaaactgtggatacttttgggtt
aattgctctagtttgcctggtcaaactaaaggtctgttcctcaagttatt
tctttacaagaaaaatatcacagcgctgagtctggtaactgaagaccaat
gctgccctatgtggcatctgaggattaaaacaaaggaccatttccaccaa
tgaaggactactgcccaaaaggagctccagatcacaggagcctaggcgac
ctagtatggcagtttcttatcattttatgatacaagctatttggatatat
ctgctataataattatccattagaattctttgaatattgcatatggtagc
tgacagcaaaaggctacagctctgctaggctacgctgccttctcttacca
ggtaaaaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15288388_15289573
seq2: B6Ng01-273N11.g_66_1225

seq1  GAATTCCTAGGTTTTGAAGGTTTACTCAGGTTAACAGAACCTAACTTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGGTTTTGAAGGTTTACTCAGGTTAACAGAACCTAACTTAAG  50

seq1  AATGCATGTCTAAATAATTAGTTGTCTGCTAACTCTGTTCAACACCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGTCTAAATAATTAGTTGTCTGCTAACTCTGTTCAACACCCTGC  100

seq1  TTCTAGAAAAATTTAAATAAGGAACACCATAGGTATATTTGATAAATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAAAATTTAAATAAGGAACACCATAGGTATATTTGATAAATAAC  150

seq1  ATTTATAAATTCCTAAGGTCTACTGAAGTCTACAGTAATCATTGTTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAATTCCTAAGGTCTACTGAAGTCTACAGTAATCATTGTTTAGC  200

seq1  CTCTTTGTCTTTCCTCACGTTGTTAAGCCTTAGCTATTTCAGTAAACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGTCTTTCCTCACGTTGTTAAGCCTTAGCTATTTCAGTAAACTGA  250

seq1  ATCATACAAGAAGCTGATATTCTATAATGGTATACTATAAAAAAAAGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACAAGAAGCTGATATTCTATAATGGTATACTATAAAAAAAAGATC  300

seq1  AGTTAAGTTCCTAATCTCTCTATAAATTATATTTATTATTTAAAGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTTCCTAATCTCTCTATAAATTATATTTATTATTTAAAGTTTTT  350

seq1  AAGGCATTTATTTATGCTTTAAAGTTTAATTTTAATGTTAAAGGATCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTTATTTATGCTTTAAAGTTTAATTTTAATGTTAAAGGATCTTC  400

seq1  AATTAAATTTTCAACTCATTTTAAGGGAAAAAGCTATAACACCCTAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTTTCAACTCATTTTAAGGGAAAAAGCTATAACACCCTAATCT  450

seq1  TATAAAAACTATTAATTTGCAAAGTATTGCCTAATTCATTTAGTAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACTATTAATTTGCAAAGTATTGCCTAATTCATTTAGTAATGAA  500

seq1  CTTTATTTAGCCTCTGGTGTGTGTTCTCAAGGTTAAGCCTAAAATCACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTAGCCTCTGGTGTGTGTTCTCAAGGTTAAGCCTAAAATCACGT  550

seq1  ATACTTAATAGATACATGGTCCTCAAATTCTTCAGAGATTTTCTGAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAATAGATACATGGTCCTCAAATTCTTCAGAGATTTTCTGAATAT  600

seq1  ATCATTTAAAATGTTTAATGTGGTAATAATAGACAGAAATATCAGTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAAAATGTTTAATGTGGTAATAATAGACAGAAATATCAGTTCTT  650

seq1  AGAGATATCTCTAAGGTCTTGAAAGAAAACAATGTGGAGGGGGGCACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATATCTCTAAGGTCTTGAAAGAAAACAATGTGGAGGGGGGCACCAA  700

seq1  CTACCCCACATGGATTATGGTTACACTAACCACTGGGGAAAACTGTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCACATGGATTATGGTTACACTAACCACTGGGGAAAACTGTCCCA  750

seq1  TAGTTTACCTGCTATCAAGGCTCCGCACAAACTGTGGATACTTTTGGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACCTGCTATCAAGGCTCCGCACAAACTGTGGATACTTTTGGGTT  800

seq1  AATTGCTCTAGTTTGCCTGGTCAAACT-AAGGTCTGTTCCTCAAGTTATT  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AATTGCTCTAGTTTGCCTGGTCAAACTAAAGGTCTGTTCCTCAAGTTATT  850

seq1  TCTTTACAAGAAAAATATCACAGCGCTGAGTCTGGTAACTGAAGACCAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACAAGAAAAATATCACAGCGCTGAGTCTGGTAACTGAAGACCAAT  900

seq1  GCTGCCCTATGTGGCATCTGAGGATTAAAACAAAGGACCATTTCCACCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCTATGTGGCATCTGAGGATTAAAACAAAGGACCATTTCCACCAA  950

seq1  TGAAGGACTACTGCCCAAAAGGAAGCCTCCAAGATCACAGGAGCCTAGGG  999
      |||||||||||||||||||||||   |||| |||||||||||||||| ||
seq2  TGAAGGACTACTGCCCAAAAGGA--GCTCC-AGATCACAGGAGCCTA-GG  996

seq1  CGACCTAGGTAATGGGCAGGTTTCTATCATTTTATTGATACAAAGCCTAT  1049
      ||||||| |||   ||||| ||  |||||||||| ||||||||   ||||
seq2  CGACCTA-GTA--TGGCAGTTTCTTATCATTTTA-TGATACAA--GCTAT  1040

seq1  TTGGATTATAATTCTTGCTATAATAATTTATCCATTTTAGATATCTTTTG  1099
      ||||| ||||  || ||||||||||| |||||||  |||||  |||||  
seq2  TTGGA-TATA--TC-TGCTATAATAA-TTATCCA--TTAGAATTCTTTGA  1083

seq1  ATATTGCATAAGTGTAGCTTTAACAGCAAAAAGCATACCAACTCCTGCCC  1149
      |||||||||| | |||||  | ||||||||| || || || || |||   
seq2  ATATTGCATATG-GTAGC--TGACAGCAAAAGGC-TA-CAGCT-CTG---  1124

seq1  CAAGGCTACAGCTGCCTTCTCTTCACAGGTAAAAATT  1186
      | ||||||| |||||||||||||  ||||||||||||
seq2  CTAGGCTAC-GCTGCCTTCTCTTACCAGGTAAAAATT  1160