BAC Information

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BAC

Clone NameB6Ng01-282K18
Chromosome16 (Build37)
Map Location 76,888,266 - 76,889,355
singlet/doubletsinglet
Overlap genenone
Upstream geneSamsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316, 1700063K16Rik
Downstream geneLOC665120, Usp25, 2810055G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282K18.bB6Ng01-282K18.g
ACCGA081828GA081829
length1,2111,093
definitionB6Ng01-282K18.b B6Ng01-282K18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttaaggaaaaaaaatctctgaagaaatttgagtagaatga
atgttataataaagtagacaggcatgctggtagttaaaggtgcggtagta
cattttctccctcagagtgtccagttgctcgggactcacatgaagaccaa
gctgcacatctgtttcatatattcaggaaggcctacagccaacctgtgga
tgttctttggttgttgtttcagactctgagagctccaagggtccatgtta
gctgagtctgttggtcttcctatcccattcatggctgcaatcctttttcc
tattcttccataagagtccccaagatccacccactgtttgactgtgggcc
tttgtatctctctgaatgagttgctgggtgaaacctctcagaggacaaat
tgctcctggtaagaccctattgttaaagacaaaatatactttggttttag
gatggagagaatcaatcatgaaatgaacaagaaaaccctttccctattgt
ctaactttcatggtcttttctgaagtcaggctgcttaggaggaaagccat
taatatacttacttgaaatggatgctgtatgctacaatactacctggcag
gatacatgtgcctatcaatgcattagtgcataattattagatgaggactg
ctccacaggaaggcattaatatctactattatagaactagcctaaaagtt
catgaccctggagaggggtggaattccactgttgtttcactaaatagaaa
tgttattaaactttcttctaaatacacccatagattagtgattctctcac
atttggtcaaagaaactcctatttgatgtgggaagtagtcaatgaagaca
cccataacagttcaaattagttagattaagtactcagtcctaagtgaaaa
gtttatgtcaactgttacaaggctcaaagaacatcttggaggatggggca
ggaaaaaaaaatgagatgtagaagaattctgtgaaatgcttgctttggac
atgacaccgatcgcgaaggcatcaattcagaggagctatggttacttgca
catagcttgcataggttaagcccaataaaataatctagatggaggggaag
aggaaggttctggggctctgctcattaggtgacagcttatagcatcttat
gggttggcttagggagaaggcagactcaccttttggattgggggagaaaa
aactggtgtac
gaattccagtacttagggggcaaatgggaaacagagacagggaaatctca
taagttaatcttgtggacaagagagcctatctcaaatgaggtggaaaaaa
atgactgtcaccatggtgatcaactgacctctacaccaggtgtgtggcac
atatgcacctgcacttagagtgaataccctagagactggaggactagcac
ggtgtgagagcgcttgcagagcattcgtaaatcattaggctcaatactca
gcactataaaataaaaatacaatagcaaaaggaattaaaacatatgactt
ttacctccctatacattcctcaagacatacaaaaaaaaaaacgaatcctg
tcatttgcaacaacgtgaatgaacctagacagcagtatgctaaatgaaat
aagccaggcagagaaaggcaagtagtgaacaatttctttgcatatgggat
gtaaatcattcacttcatgggaacaggagtcagggcataggaaaagtggt
ggtatttgtcaaagggcataaacgtttaacaatatgatgaattgtttctg
caaatgtagagtgttatggccatagttaacaataacatatcgcacacttc
aagtctgctcaaaagagattgtaagaatctgtagttccatcatcaacaaa
agaaagcttcgtgagatgatgaatatgctaatttccttgactgtgacaat
aatttacaatgaagacacaaattatcatacattacacttaaatacaagca
attattattttttttatcaatcatacctcagtaaaactggaaagaaattc
ccaaaggaaaagattactctcaaacccaggcaaaaactaaaatctattaa
catgcccaattataataatatattagttctaataattaggtttttttttt
aagtgggctatacccaaatatcagtcaaacaatgtaatcaataaggaaat
aattcatgtctacttaaccttaattttcaacttaccataacctagccatc
tcagggaaagcctctgttgaggatggtctagatgatagtctgtggggcgg
attttcctcagatgctaatgccaagagggtctagcttcatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76888266_76889355
seq2: B6Ng01-282K18.g_65_1157

seq1  GAATTCCAGTACTTAGGGGGCAAATGGGAAACAGAGACAGGGAAATCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTACTTAGGGGGCAAATGGGAAACAGAGACAGGGAAATCTCA  50

seq1  TAAGTTAATCTTGTGGACAAGAGAGCCTATCTCAAATGAGGTGGAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAATCTTGTGGACAAGAGAGCCTATCTCAAATGAGGTGGAAAAAA  100

seq1  ATGACTGTCACCATGGTGATCAACTGACCTCTACACCAGGTGTGTGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTCACCATGGTGATCAACTGACCTCTACACCAGGTGTGTGGCAC  150

seq1  ATATGCACCTGCACTTAGAGTGAATACCCTAGAGACTGGAGGACTAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCACCTGCACTTAGAGTGAATACCCTAGAGACTGGAGGACTAGCAC  200

seq1  GGTGTGAGAGCGCTTGCAGAGCATTCGTAAATCATTAGGCTCAATACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGAGAGCGCTTGCAGAGCATTCGTAAATCATTAGGCTCAATACTCA  250

seq1  GCACTATAAAATAAAAATACAATAGCAAAAGGAATTAAAACATATGACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATAAAATAAAAATACAATAGCAAAAGGAATTAAAACATATGACTT  300

seq1  TTACCTCCCTATACATTCCTCAAGACATACAAAAAAAAAAACGAATCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTCCCTATACATTCCTCAAGACATACAAAAAAAAAAACGAATCCTG  350

seq1  TCATTTGCAACAACGTGAATGAACCTAGACAGCAGTATGCTAAATGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCAACAACGTGAATGAACCTAGACAGCAGTATGCTAAATGAAAT  400

seq1  AAGCCAGGCAGAGAAAGGCAAGTAGTGAACAATTTCTTTGCATATGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGGCAGAGAAAGGCAAGTAGTGAACAATTTCTTTGCATATGGGAT  450

seq1  GTAAATCATTCACTTCATGGGAACAGGAGTCAGGGCATAGGAAAAGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATCATTCACTTCATGGGAACAGGAGTCAGGGCATAGGAAAAGTGGT  500

seq1  GGTATTTGTCAAAGGGCATAAACGTTTAACAATATGATGAATTGTTTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTGTCAAAGGGCATAAACGTTTAACAATATGATGAATTGTTTCTG  550

seq1  CAAATGTAGAGTGTTATGGCCATAGTTAACAATAACATATCGCACACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTAGAGTGTTATGGCCATAGTTAACAATAACATATCGCACACTTC  600

seq1  AAGTCTGCTCAAAAGAGATTGTAAGAATCTGTAGTTCCATCATCAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGCTCAAAAGAGATTGTAAGAATCTGTAGTTCCATCATCAACAAA  650

seq1  AGAAAGCTTCGTGAGATGATGAATATGCTAATTTCCTTGACTGTGACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTTCGTGAGATGATGAATATGCTAATTTCCTTGACTGTGACAAT  700

seq1  AATTTACAATGAAGACACAAATTATCATACATTACACTTAAATACAAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACAATGAAGACACAAATTATCATACATTACACTTAAATACAAGCA  750

seq1  ATTATTATTTTTTTTATCAATCATACCTCAGTAAAACTGGAAAGAAATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTTTTTTTATCAATCATACCTCAGTAAAACTGGAAAGAAATTC  800

seq1  CCAAAGGAAAAGATTACTCTCAAACCCAGGCAAAAACTAAAATCTATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGAAAAGATTACTCTCAAACCCAGGCAAAAACTAAAATCTATTAA  850

seq1  CATGCCCAATTATAATAATATATTAGTTCTAATAATTAGG-TTTTTTTTT  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CATGCCCAATTATAATAATATATTAGTTCTAATAATTAGGTTTTTTTTTT  900

seq1  AAGT-GGCTATACCCAAATATCAGTCAAACAATGTAATCAATAAGGAAAT  948
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCTATACCCAAATATCAGTCAAACAATGTAATCAATAAGGAAAT  950

seq1  AATTCATGTCCTACTTAACCTTAATTTTCAACTTACCATAACCTAGCCAT  998
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGT-CTACTTAACCTTAATTTTCAACTTACCATAACCTAGCCAT  999

seq1  CTTCAGGGGAAAGCCTCTGTTGAGGAATGGTCTAGATGATAGTCTGTGGG  1048
      | ||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  C-TCA-GGGAAAGCCTCTGTTGAGG-ATGGTCTAGATGATAGTCTGTGGG  1046

seq1  --CGATTTT-CTCAGATGCTAATG-CAAGAGGGTCTAGC-TCATGGT  1090
         |||||| |||||||||||||| |||||||||||||| |||||||
seq2  GCGGATTTTCCTCAGATGCTAATGCCAAGAGGGTCTAGCTTCATGGT  1093