BAC Information

Click to search

BAC

Clone NameB6Ng01-284H19
Chromosome16 (Build37)
Map Location 21,575,445 - 21,575,602
singlet/doubletsinglet
Overlap geneVps8
Upstream geneBC052055, EG328644, Alg3, 1810009K13Rik, Camk2n2, Ece2, Psmd2, LOC100043475, Eif4g1, 2900046G09Rik, Clcn2, Polr2h, Thpo, Chrd, LOC666255, LOC671504, EG666274, EG625060, LOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik
Downstream gene2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph, Senp2, EG239760, Igf2bp2, EG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284H19.bB6Ng01-284H19.g
ACCGA083176GA083177
length1,180954
definitionB6Ng01-284H19.b B6Ng01-284H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttctctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgatttct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggcttttttttggttgggagactattaataactgcttctatttc
tttaggggatatgggactgtttagaaggtcaacttgatcctgattcaact
ttggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcc
agttttgttgagtataagcttttgtagaaggatctgatggtgttttggat
ttcttcaggatctgttgttatgtctcccttttcatttctgattttgttga
ttaggattttgtccctttgccctctagtgagtctagctaagggtttatct
atcttgttgattttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttaatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttctt
cttgggaggtactcagagctatgagtttccctctagaaatgctttcattg
tgtcccaaggttggtacgttggtggcttcattttcattaaactctaaaag
tcttatttctttctttatctttcctggacagtatcatgagaagagtggtg
tcagtttccacgtgaatgttggcttcatctaagttgtatgcagatcagtc
ctaaggcaatgctgggtctgtcaatatgga
gaattcaatgaaaatgaaggcacaatacacccaaacttatgggacacaag
gaaagcagtgccaagaggaaaattcatagcactaagtaccttcataaaga
aattggagatatatactagtgtgatggtttgtatattcttggaccaggga
gtggcacaatctggaggtgtggccttgatggaatacgtgtgacctggttg
gaataggtgtgtcactgtgggtgtgggcttaagactctcaccgcagttgc
ctggaagtcagtcttccactagcagcctttggatgaagacgtagaactct
cagctctgcctgcgccatgacagcctggatgctgccatgctcccaccttg
atgataatggactgaacctctgaacctgtaagctagccccaattaaatgt
tattttttataagacttgccttggtcatggtgtctattcacagcagtaaa
gccctgagacaactagcaacttaaaaacacacctgaaagctctagaacaa
aaagaagcaaccatacccaaaaggagtagatggaaggaaagagctaaact
catgactaaaatcaatccattaaaaacaagagagcagccaggcgtggtgg
tacatgtctttaatcccagcacttgggaggcagaggcaggtggatttctg
agttcgaggtcagcctggtctacaaagtgagttccaggacagccaaaaaa
aaaaaaaaaggaaaagaaaagaaacaagagaacagtacaaagaatcatta
aaaccaagagctggttctttgagaaaatcaacaagatagataaaccctta
actaaatgaagtagaagatacagagacagaatccaaagtaacaaaatcag
aaatgtaaagggagtcataacaacagatcctgaggtaatttttttttaaa
aatcattatgtcttatgtcaaaagtctatattctacaaaactgggaagat
ctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_21575445_21575602
seq2: B6Ng01-284H19.g_658_784

seq1  GTGGTGGTGCACGTCTTTAATCCCAGTACTTGGGAGGCAGAGGCAGGCGG  50
      |||||||| || |||||||||||||| |||||||||||||||||||| ||
seq2  GTGGTGGTACATGTCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGG  50

seq1  ATTTCTCAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGC  100
      |||||| ||||||||| |||||||||||||| ||||||||||||||||||
seq2  ATTTCTGAGTTCGAGGTCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  100

seq1  CAGGGCTACACAGAGAAACCCTGTCTCCAAAAACAAAAACAAAAAAAGGA  150
      |                               | ||||| ||||||||||
seq2  C-------------------------------AAAAAAAAAAAAAAAGGA  119

seq1  AAAGAAAA  158
      ||||||||
seq2  AAAGAAAA  127