BAC Information

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BAC

Clone NameB6Ng01-290A16
Chromosome16 (Build37)
Map Location 46,640,543 - 46,641,671
singlet/doubletsinglet
Overlap genenone
Upstream geneBC016579, Tmprss7, Tagln3, Abhd10, Phldb2, EG667418, Plcxd2, 4930546O09Rik, Cd96, AL024110, Pvrl3
Downstream geneLOC628757, LOC628776
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290A16.bB6Ng01-290A16.g
ACCGA087280GA087281
length1,135131
definitionB6Ng01-290A16.b B6Ng01-290A16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcctcaatcaaaaagtttttctctaagaaattttaaattttac
ttctgtgtttacatctctgatgcattttgagttaatttctgtatgtggaa
ttaaatgtagatgaaaaattcattcttttccaagtgaacttcatccactt
attgcaaggatgctgtcctttgcctgttggtttcctttaaaactttgggg
aaaagtctgtttatcacttttatttatttatttatttttaattaggtatt
ttcttcatttacatttcaaatgctatcgcaaaagtgtttatcacttttat
ttcgatctatatcaattttttctcttgctccaatgttccacatttctgtg
tttccactgcattcacacaataacactttgtgtgggtgtaacccaaaggt
gtgtgtgtgtgttaaaagtttggattccaagttggtacacagcctttagc
cagtggggacttctgggaaattgttaagtcattgagagcatagtctagaa
aggaattagggaatcctcactacacctctaggtgttctttctggctcaag
agttaagcagtttctaccactgtgatgtttccttaccagagctccaatgt
aatggacccattcaatttggaagtgggtccttcacatccatgaaccccca
taacattttcatcctctcaactccttcatccctgtttatttgcaacagtg
tttaatgtgtagaaaactggcctcaaatatttttacgtagccaaggaaga
ccctgaactactgattgtgctagctctatcttccagttactgggataata
aatatttacaaccatgcccaatttatgccatgttaacgatcaaaccgtgg
cttcctgtatgctacacaatcactctaccaaccaggggtaaataacaccc
ctggtgccaatgctttctctttaaagttcactcttctggtatttcattgt
agtaattgaactctgtctgataacaacatttacagctttaaggaggcata
ttatgtgtcctgaaagctcagtatacaagatttatttggaatattacagt
tctttgtcctttctatatacttcataatagtcaacttggttgatattctt
cccaaaataataccagcctgtgaatataattaaga
ctgggccaggaatgagagtgggtgggttggggagcagggggaagggggag
gggatggggaatttttgcatgtaaatttgattgggaatgaatcttacatg
taattacagtataggggttttggactgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_46640543_46641671
seq2: B6Ng01-290A16.b_44_1178 (reverse)

seq1  TCTTAATTAATATCACA-GCTGGTATTATTTT-GGAAG-ATATCAACAAA  47
      |||||||||   ||||| |||||||||||||| ||||| |||||||| ||
seq2  TCTTAATTATATTCACAGGCTGGTATTATTTTGGGAAGAATATCAACCAA  50

seq1  G-TGACTA-TATGAAGTATATAGAAA-GACAAAGAAACTGTAATATT-CA  93
      | |||||| ||||||||||||||||| ||||||| |||||||||||| ||
seq2  GTTGACTATTATGAAGTATATAGAAAGGACAAAG-AACTGTAATATTCCA  99

seq1  AATAAATTCTGTATACTGAGC-TTCAGGACACATATTATTGCCTCCTTAA  142
      |||||||  |||||||||||| ||||||||||||| || |||||||||||
seq2  AATAAATCTTGTATACTGAGCTTTCAGGACACATAATA-TGCCTCCTTAA  148

seq1  AGCTGTAAATGTTG-TATCAGACAGAGTTCAATTACTACAATGAAATACC  191
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCTGTAAATGTTGTTATCAGACAGAGTTCAATTACTACAATGAAATACC  198

seq1  AGAAGAGTGAACTTTTAAAGAGAAAGCATTGGCACCAGGGGTGTTATTTA  241
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGTGAAC-TTTAAAGAGAAAGCATTGGCACCAGGGGTGTTATTTA  247

seq1  CCCCTGGTTGGTAGAGTGATTGTGTAGCATACAGGAAGCCACGGTTTGAT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGTTGGTAGAGTGATTGTGTAGCATACAGGAAGCCACGGTTTGAT  297

seq1  CGTTAACATGGCATAAATTGGGCATGGTTGTAAATATTTATTATCCCAGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTAACATGGCATAAATTGGGCATGGTTGTAAATATTTATTATCCCAGT  347

seq1  AACTGGAAGATAGAGCTAGCACAATCAGTAGTTCAGGGTCTTCCTTGGCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAGATAGAGCTAGCACAATCAGTAGTTCAGGGTCTTCCTTGGCT  397

seq1  ACGTAAAAATATTTGAGGCCAGTTTTCTACACATTAAACACTGTTGCAAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAAAAATATTTGAGGCCAGTTTTCTACACATTAAACACTGTTGCAAA  447

seq1  TAAACAGGGATGAAGGAGTTGAGAGGATGAAAATGTTATGGGGGTTCATG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGGGATGAAGGAGTTGAGAGGATGAAAATGTTATGGGGGTTCATG  497

seq1  GATGTGAAGGACCCACTTCCAAATTGAATGGGTCCATTACATTGGAGCTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGAAGGACCCACTTCCAAATTGAATGGGTCCATTACATTGGAGCTC  547

seq1  TGGTAAGGAAACATCACAGTGGTAGAAACTGCTTAACTCTTGAGCCAGAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGAAACATCACAGTGGTAGAAACTGCTTAACTCTTGAGCCAGAA  597

seq1  AGAACACCTAGAGGTGTAGTGAGGATTCCCTAATTCCTTTCTAGACTATG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACCTAGAGGTGTAGTGAGGATTCCCTAATTCCTTTCTAGACTATG  647

seq1  CTCTCAATGACTTAACAATTTCCCAGAAGTCCCCACTGGCTAAAGGCTGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAATGACTTAACAATTTCCCAGAAGTCCCCACTGGCTAAAGGCTGT  697

seq1  GTACCAACTTGGAATCCAAACTTTTAACACACACACACACCTTTGGGTTA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAACTTGGAATCCAAACTTTTAACACACACACACACCTTTGGGTTA  747

seq1  CACCCACACAAAGTGTTATTGTGTGAATGCAGTGGAAACACAGAAATGTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACACAAAGTGTTATTGTGTGAATGCAGTGGAAACACAGAAATGTG  797

seq1  GAACATTGGAGCAAGAGAAAAAATTGATATAGATCGAAATAAAAGTGATA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTGGAGCAAGAGAAAAAATTGATATAGATCGAAATAAAAGTGATA  847

seq1  AACACTTTTGCGATAGCATTTGAAATGTAAATGAAGAAAATACCTAATTA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTTTGCGATAGCATTTGAAATGTAAATGAAGAAAATACCTAATTA  897

seq1  AAAATAAATAAATAAATAAAAGTGATAAACAGACTTTTCCCCAAAGTTTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATAAATAAATAAAAGTGATAAACAGACTTTTCCCCAAAGTTTT  947

seq1  AAAGGAAACCAACAGGCAAAGGACAGCATCCTTGCAATAAGTGGATGAAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAACCAACAGGCAAAGGACAGCATCCTTGCAATAAGTGGATGAAG  997

seq1  TTCACTTGGAAAAGAATGAATTTTTCATCTACATTTAATTCCACATACAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGGAAAAGAATGAATTTTTCATCTACATTTAATTCCACATACAG  1047

seq1  AAATTAACTCAAAATGCATCAGAGATGTAAACACAGAAGTAAAATTTAAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAACTCAAAATGCATCAGAGATGTAAACACAGAAGTAAAATTTAAA  1097

seq1  ATTTCTTAGAGAAAAACTTTTTGATTGAGGAAGAATTC  1129
      ||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTAGAGAAAAACTTTTTGATTGAGGAAGAATTC  1135