BAC Information

Click to search

BAC

Clone NameB6Ng01-294C14
Chromosome16 (Build37)
Map Location 12,256,166 - 12,256,722
singlet/doubletsinglet
Overlap gene2700045P11Rik
Upstream geneTnfrsf17, 4933437K13Rik, LOC100043171, C530044N13Rik
Downstream geneEG622509, LOC622553, Ercc4, Gt4-1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294C14.bB6Ng01-294C14.g
ACCGA090361GA090362
length1,013502
definitionB6Ng01-294C14.b B6Ng01-294C14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctctgaagatctgagtgcctctggaacactgggcttttctctg
ttttctctgaacctattttacaccaagccctgtgctaagactcctactca
catggcctcatacatttactcccaccaatcctatgcagaatggctactct
gattgcctccaatttagcaatggaagaaacaggagttcagagcacatgag
tggcttgagtaagaacacaaaggcaaacaactaagcagtcagaacaagtg
agcaacagcagcttccttcaaatcaggtgctccagtgcagccctagaaga
tccacattcactgtagagaacagttttcaaaagctggcttcaaacttgat
tgtgagatcgaagcagtatcttccttttgtggtctttctacaaatgcagc
tggaatccccagggttcgccgtgagtggtgcaacatcagtgactactttg
ggtgatgtccatgtgttgaggtttggtctgttgctatgtatcataatgct
aaatcctgtacagaaggtctaggtctacaagtgaattctcacatttatca
gcttttcttgcataaaccttgtttcttaatttaaggctattggttaaata
aaaaatggctacagccagttacaggagggattaggggcaggagggttttt
tagttacttggatgagcagggtggaaagaggaaaataagcagagaaggaa
gagaagaaggaagagaagaaggcaccatgaaagataccttacctgagcaa
atgcaaggccatgaaaggtgatagaccatgaacacatgaccaggagaaac
aacaggtatttgggatacatactggggaggtagctagcccagcagttaaa
aaaaatagaataaagggttactcccagtaattgtcaaagccaaataaaat
aaccatagtctgagtctcattttattttttaagctagtcggcgataagct
ttaattggttatactacatcatggaaagcaatagacactgaaagatgatg
tgatgctgcactt
tttatatattttgaatattaactgtctgtcagatgtggagttggtgaaaa
aaatttctcattcagtgggctgccattgtgtctaattgatggcatccttt
gctttatagaagcttttagtttcatgaattcccatttattaactgttgac
cttagtgcctgtgctattagtgttctgttcaggaagttgtctcctgtacc
aatgatagagcaaccctagcaaaggcccccagtaatggagaatatggatc
ctgaaaaggccatcttttgtaaccaggcaaggcctcaagtggaggaattg
ggacaccaacatagccaccaaacctttggcctatggtgtgtcctgccttc
agagtgttctgggactggagcctagtggaattgtcatccaagagaccaga
gagacttcatgcagcaacagatgggaacagatacagactacgaccacagc
caaacattagacagagcttcagaagtctgtggaggagggggaggaaggat
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12256166_12256722
seq2: B6Ng01-294C14.b_47_603 (reverse)

seq1  GAAAAGCTGATAAATGTGAGAATTCACTTGTAGACCTAGACCTTCTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTGATAAATGTGAGAATTCACTTGTAGACCTAGACCTTCTGTAC  50

seq1  AGGATTTAGCATTATGATACATAGCAACAGACCAAACCTCAACACATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTAGCATTATGATACATAGCAACAGACCAAACCTCAACACATGGA  100

seq1  CATCACCCAAAGTAGTCACTGATGTTGCACCACTCACGGCGAACCCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCCAAAGTAGTCACTGATGTTGCACCACTCACGGCGAACCCTGGG  150

seq1  GATTCCAGCTGCATTTGTAGAAAGACCACAAAAGGAAGATACTGCTTCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAGCTGCATTTGTAGAAAGACCACAAAAGGAAGATACTGCTTCGA  200

seq1  TCTCACAATCAAGTTTGAAGCCAGCTTTTGAAAACTGTTCTCTACAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAATCAAGTTTGAAGCCAGCTTTTGAAAACTGTTCTCTACAGTGA  250

seq1  ATGTGGATCTTCTAGGGCTGCACTGGAGCACCTGATTTGAAGGAAGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATCTTCTAGGGCTGCACTGGAGCACCTGATTTGAAGGAAGCTGC  300

seq1  TGTTGCTCACTTGTTCTGACTGCTTAGTTGTTTGCCTTTGTGTTCTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCACTTGTTCTGACTGCTTAGTTGTTTGCCTTTGTGTTCTTACT  350

seq1  CAAGCCACTCATGTGCTCTGAACTCCTGTTTCTTCCATTGCTAAATTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCACTCATGTGCTCTGAACTCCTGTTTCTTCCATTGCTAAATTGGA  400

seq1  GGCAATCAGAGTAGCCATTCTGCATAGGATTGGTGGGAGTAAATGTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCAGAGTAGCCATTCTGCATAGGATTGGTGGGAGTAAATGTATGA  450

seq1  GGCCATGTGAGTAGGAGTCTTAGCACAGGGCTTGGTGTAAAATAGGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGTGAGTAGGAGTCTTAGCACAGGGCTTGGTGTAAAATAGGTTCA  500

seq1  GAGAAAACAGAGAAAAGCCCAGTGTTCCAGAGGCACTCAGATCTTCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAACAGAGAAAAGCCCAGTGTTCCAGAGGCACTCAGATCTTCAGAG  550

seq1  AGAATTC  557
      |||||||
seq2  AGAATTC  557