BAC Information

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BAC

Clone NameB6Ng01-300I21
Chromosome16 (Build37)
Map Location 61,821,152 - 61,822,307
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043524, LOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300I21.bB6Ng01-300I21.g
ACCGA095103GA095104
length9541,149
definitionB6Ng01-300I21.b B6Ng01-300I21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatagagattgagagtcaattgttatttttgtatggaataat
aaaaaagtccactatacctagaacattcctgtacaatgaaagaatttctg
gacttatcatcatcctgtacttcaagctgtactatagaaaaatagtaaat
aaaacctgaatgatagtggtatagaaacagattgatcaatagaatcaaac
tgaagaatctgaaataagcccacactcctttggacacttgatttttgaga
aagaatccaaaacaggacataaattcctgaagaaaaaaggaagggctcag
gcactcagatccacaaattaataattgggaccttatgaaactgaaaagct
tctgtaaggcaaaaggttaataggagaaaatggcagcctactgaatggga
aaatgtcttcacccactctacatctgataaagggctaataccaaaaatat
atgaagaactcaagaagtgagagatcaacaagctaaataacccaaattaa
aaatgaattacaaactaaactcaaagtagtcaacaaagtactctctaatg
gctaagaagtacttacagaatattgtaagtaaagatatggaacttgagag
tattatctagagtgaggtaacctagagccagaaagacatatatagtatca
tatagtatgcataacttataagtggacattagtcatatagtgcatgaaaa
ccatgcaataatacacagacccaaaggaaactgggaaagaaagagttctc
aaggagggaagtatgaatatcactcataagggacacctaattagtcattg
gaagtagatggaaagaggggactgggtaggagaggaggtaaggaggagaa
tagggatttgtgacatgtgtgaggaaatgagagtgagagaacactggaag
tagggtggaagtctgcccggccttcttctggtgactgctgtaaggcctaa
atta

gaattctgtactacaagatcacacatccaagactatctatgcatcagaaa
gtggccttgattgatttgtaaaagtaagaaaatgtaaaggcatgagataa
gcaaggatggaaaccaagaaggaattgaaaggggaaggatcacgataaat
cattgtatgaaaatcccacataactaaccaaagcattcctttaatattgg
aaatagtttaaactgagcctgaattttaactttatattattttgcagaca
ttcttcttcttccaagattgcaataaagaaactcaggtaatttccatatt
tcctactcatcagaagctattcctatcgagtgttcattggagattatgaa
atttacttagaattctattttttttctaaaatttaaaaactggtatatga
atgaaagtatatttaataatgctcattttagcacttctttttctaaaaat
aaaacacttaaaaattaaaaacgtaatgataggataatactgcaatggtt
cacctgatgacatcatcagtattctttctggcattaacttccttcatttc
tgctctttgtggttgttttacacttatagttgtactcagtgaaaaaaatt
gtacagcccattctaaaaccatctgctaagcagaacaggcctgttttatt
gaatctcactgactaaatttctgtgaaactgatatgcactattctggtca
aatcacaatctgagaatggcaaattaccagaaatgaaatcagaaaaaaag
tgcaatcactgctttttaaattaattttcttcttttgaaatgataatatt
acattttaaattgcttaaaatgcttatatagtgtaagcatttggaaataa
ttttaaatgctgatgaataaagccagaggaacttgaaaaaattgatcttt
aaaattttctttttcctttgacatccataaatggaacttagaagacaaaa
tagtttctctcttgctgctaagattatcttaccattataacatccctgat
tattacaattttccactctatattatatgtagttatcttttgtaaataaa
tgctgaaatatgatattggattttagccaatgattcctcacctcccatcc
acttaaaataaaaaatataatactaaatgcatactggatcagggaatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61821152_61822307
seq2: B6Ng01-300I21.g_65_1213 (reverse)

seq1  TAATTCACTGATTCAGTATGCATTTAGTATTAATTATTTTTTTAATTTTT  50
      |||||| ||||| |||||||||||||||||||  ||||||||    ||||
seq2  TAATTCCCTGATCCAGTATGCATTTAGTATTA--TATTTTTT---ATTTT  45

seq1  AAGTGGATGGGAGTTGA-GAATCATTTGCTAAAATCCAATAATCATATTT  99
      ||||||||||||| ||| |||||||| ||||||||||||| |||||||||
seq2  AAGTGGATGGGAGGTGAGGAATCATTGGCTAAAATCCAAT-ATCATATTT  94

seq1  CAGCATTTATTTAC-AAAGATAACTACATATATATTAGGAGTGGAAAATT  148
      |||||||||||||| ||||||||||||||||| ||   ||||||||||||
seq2  CAGCATTTATTTACAAAAGATAACTACATATA-ATATAGAGTGGAAAATT  143

seq1  GTAATAATCAGGGATGTTTATAATTGGTAAGATAATCTTAGCAGCAAGAG  198
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  GTAATAATCAGGGATG-TTATAA-TGGTAAGATAATCTTAGCAGCAAGAG  191

seq1  AGAAACTATTTTGTCTTCTAAGTTCCATTTATGGATGTCAAAGGAAAAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTATTTTGTCTTCTAAGTTCCATTTATGGATGTCAAAGGAAAAAG  241

seq1  AAAATTTTAAAGATCAATTTTTTCAAGTTCCTCTGGCTTTATTCATCAGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAAAGATCAATTTTTTCAAGTTCCTCTGGCTTTATTCATCAGC  291

seq1  ATTTAAAATTATTTCCAAATGCTTACACTATATAAGCATTTTAAGCAATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATTATTTCCAAATGCTTACACTATATAAGCATTTTAAGCAATT  341

seq1  TAAAATGTAATATTATCATTTCAAAAGAAGAAAATTAATTTAAAAAGCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTAATATTATCATTTCAAAAGAAGAAAATTAATTTAAAAAGCAG  391

seq1  TGATTGCACTTTTTTTCTGATTTCATTTCTGGTAATTTGCCATTCTCAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGCACTTTTTTTCTGATTTCATTTCTGGTAATTTGCCATTCTCAGA  441

seq1  TTGTGATTTGACCAGAATAGTGCATATCAGTTTCACAGAAATTTAGTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATTTGACCAGAATAGTGCATATCAGTTTCACAGAAATTTAGTCAG  491

seq1  TGAGATTCAATAAAACAGGCCTGTTCTGCTTAGCAGATGGTTTTAGAATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTCAATAAAACAGGCCTGTTCTGCTTAGCAGATGGTTTTAGAATG  541

seq1  GGCTGTACAATTTTTTTCACTGAGTACAACTATAAGTGTAAAACAACCAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTACAATTTTTTTCACTGAGTACAACTATAAGTGTAAAACAACCAC  591

seq1  AAAGAGCAGAAATGAAGGAAGTTAATGCCAGAAAGAATACTGATGATGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAGAAATGAAGGAAGTTAATGCCAGAAAGAATACTGATGATGTC  641

seq1  ATCAGGTGAACCATTGCAGTATTATCCTATCATTACGTTTTTAATTTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGTGAACCATTGCAGTATTATCCTATCATTACGTTTTTAATTTTTA  691

seq1  AGTGTTTTATTTTTAGAAAAAGAAGTGCTAAAATGAGCATTATTAAATAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTTATTTTTAGAAAAAGAAGTGCTAAAATGAGCATTATTAAATAT  741

seq1  ACTTTCATTCATATACCAGTTTTTAAATTTTAGAAAAAAAATAGAATTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATTCATATACCAGTTTTTAAATTTTAGAAAAAAAATAGAATTCT  791

seq1  AAGTAAATTTCATAATCTCCAATGAACACTCGATAGGAATAGCTTCTGAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATTTCATAATCTCCAATGAACACTCGATAGGAATAGCTTCTGAT  841

seq1  GAGTAGGAAATATGGAAATTACCTGAGTTTCTTTATTGCAATCTTGGAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGAAATATGGAAATTACCTGAGTTTCTTTATTGCAATCTTGGAAG  891

seq1  AAGAAGAATGTCTGCAAAATAATATAAAGTTAAAATTCAGGCTCAGTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAATGTCTGCAAAATAATATAAAGTTAAAATTCAGGCTCAGTTTA  941

seq1  AACTATTTCCAATATTAAAGGAATGCTTTGGTTAGTTATGTGGGATTTTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTTCCAATATTAAAGGAATGCTTTGGTTAGTTATGTGGGATTTTC  991

seq1  ATACAATGATTTATCGTGATCCTTCCCCTTTCAATTCCTTCTTGGTTTCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATGATTTATCGTGATCCTTCCCCTTTCAATTCCTTCTTGGTTTCC  1041

seq1  ATCCTTGCTTATCTCATGCCTTTACATTTTCTTACTTTTACAAATCAATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGCTTATCTCATGCCTTTACATTTTCTTACTTTTACAAATCAATC  1091

seq1  AAGGCCACTTTCTGATGCATAGATAGTCTTGGATGTGTGATCTTGTAGTA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCACTTTCTGATGCATAGATAGTCTTGGATGTGTGATCTTGTAGTA  1141

seq1  CAGAATTC  1156
      ||||||||
seq2  CAGAATTC  1149


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