BAC Information

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BAC

Clone NameB6Ng01-301F15
Chromosome16 (Build37)
Map Location 75,020,268 - 75,161,717
singlet/doubletdoublet
Overlap genenone
Upstream geneRobo2, LOC665042
Downstream geneD930038D03Rik, Rbm11, Stch, LOC546667, Samsn1, 4930578N18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301F15.bB6Ng01-301F15.g
ACCGA095684GA095685
length1,1631,072
definitionB6Ng01-301F15.b B6Ng01-301F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,160,570 - 75,161,717)(75,020,268 - 75,021,341)
sequence
gaattctgcatgcagctttcacccccaattctttgaatatgacaaaaaga
aaacccaaaaaaacctaaggaaacacaaatctagacactaagcaccagac
atccagtaatacttactgatccattttaattcttttttatatatttttat
taggtattttcctcatttacatttccaatgctatcccaaaagtccccgat
accctctcccccaaccccctccccacccactcccactttttgcccctggt
gttcccctgtactagggcatataaagtttgcatgtccaatgggcctctct
ttccagtgatggctgactaggctatcttctgatacatatgcagctagagt
caagagctccgggagtacaggttagttcataatgttgttccacctatagg
gttgcagatctttagctccttgggtactttttctagttcctccattgggg
gtcctgtgatccatccaatagctgactgtgagcatccactttcttgatgc
tttaccactcattgtctaagatttacatatttttctctgctaaaatattc
atattgactttcagatcttgattctatagactctggagactggatgaaat
tctatagattctagagattggatgtccttaagtgtatgaagtcctcaaac
ctagggcacactacatactctgatcattgcttttaatctaaaaaaatgca
gtagtattattggctggttgcagaagtgccacttaaacttctgaacaggt
agatacaggtacttcactactgtcacagaggattagcttcaactattgat
gaatcctagccatggtggaagatcttagaaaaaaaatctttcataaaatt
gtagtattgattttatataaaaagacaagtgtgtattttattttatcaaa
aatgtatttggttaagcatgtctttagttacttggagcagttgtgggaaa
aacaatgttaatctgattttcagatttcaaatgaatccctttttattacg
catatttttcctatctcaaatggcttagggaaattaacaataggatcaaa
ttcttccaattcctgaaaatttctctaaattgctttcagccattcattca
aagtaagaagtccaaatatttgcctttggagtgtgtgcagaaatggtccc
tcaatcctatgga
gaattccctgtagtcaagggggtcacatcaatgttctagcttacaattaa
gaatagttttatggatgccaaataaccattgacaaatcagctttaatatt
acaaaataaaaactcacttaatgtgtatattttgttgtatagtaaggttt
aaacatcttttcaaagaaagcatgtaatataaatgtccttggataggaat
ttttacatgtatttaacatgtatgtatttttagaatacttcaacattatt
caatttggcaaatataagcattattcccaactgtcttcccattatatcta
attttcaacatagcatacattaaaaatatgcttgtagaataatgtttgtt
aaagtaatctgttaaaataggaatgaaaggaaggaatgttttctggaatt
tccaggtaccgtatccatctaatttgattgaggtgtaaaagtattgtaaa
aggttatattgttcattgttagagttcttttctaccggtttatatatagg
atgcacaattattttgaacattataggtattcttatacattacttgacca
atcctactcagagtattattgacaatatcctgctcagtggtgctctaaaa
accatgttcagcaaaataatatcaacattattatacatcacatactgtga
aaacgataaagaactgaaatatattggtaaatgtatactatgatgtctga
tcactgggaaaccattctatataaaaacaagtatccctaatcaagtcaat
tatttttttatatttatatttatatgtttttagatgttataactaatatt
aatttatcccttctaatttctaatcttcttgccattttgcatgaatttgt
ccatcaactttcattaatatattttattagccttatgactcttttgtact
gtctacatcaatgaaataacaattgaagtaacttcatattagatttcact
gaagactatggagttatacagtgtaacacagaaaaacactgttattctga
ttataaatatcattggatattgtagtttagtataatattatgaagagatt
aaagttaacaatttcctttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_75160570_75161717
seq2: B6Ng01-301F15.b_44_1206 (reverse)

seq1  TCCATAGGTATGA-GGACCA-TTCTGCACA---TC--AAAGCAAATATTT  43
      ||||||||  ||| |||||| |||||||||   ||  || ||||||||||
seq2  TCCATAGGATTGAGGGACCATTTCTGCACACACTCCAAAGGCAAATATTT  50

seq1  GGACTTCTTACTTTGAATG-ATGGCTGAAAGCAATTTAGAG-AATTTTCA  91
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  GGACTTCTTACTTTGAATGAATGGCTGAAAGCAATTTAGAGAAATTTTCA  100

seq1  GGAATTGGGAAGAATTTGATCTTAATGTTAATTT-CCTAAGCCATTTGAG  140
      |||||| |||||||||||||| || ||||||||| |||||||||||||||
seq2  GGAATT-GGAAGAATTTGATCCTATTGTTAATTTCCCTAAGCCATTTGAG  149

seq1  ATAAGGAAAATATGCGTAATAAAAA-GGATTCAATATGAAATCTGAAAAT  189
      ||| | ||||||||||||||||||| |||||| || ||||||||||||||
seq2  ATAGGAAAAATATGCGTAATAAAAAGGGATTC-ATTTGAAATCTGAAAAT  198

seq1  CAGATTAACATTGTTTTT-CCACAACTGCT-CAAGTAAACTAAAGACATG  237
      |||||||||||||||||| ||||||||||| ||||| |||||||||||||
seq2  CAGATTAACATTGTTTTTCCCACAACTGCTCCAAGT-AACTAAAGACATG  247

seq1  CTTAA-CAAATACATTTTTGATAAA--TAAATACACACTTGTCTTTTTAT  284
      ||||| |||||||||||||||||||   ||||||||||||||||||||||
seq2  CTTAACCAAATACATTTTTGATAAAATAAAATACACACTTGTCTTTTTAT  297

seq1  ATAAAATCAATACTACAATTTTATG-AAGATTTTTTTTCTAAGATCTTCC  333
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAAAATCAATACTACAATTTTATGAAAGATTTTTTTTCTAAGATCTTCC  347

seq1  ACCATGGCTAGGATTCATCAATAGTTGAAGCTAATCCTCTGTGACAGTAG  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGCTAGGATTCATCAATAGTTGAAGCTAATCCTCTGTGACAGTAG  397

seq1  TGAAGTACCTGTATCTACCTGTTCAGAAGTTTAAGTGGCACTTCTGCAAC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTACCTGTATCTACCTGTTCAGAAGTTTAAGTGGCACTTCTGCAAC  447

seq1  CAGCCAATAATACTACTGCATTTTTTTAGATT-AAAGCAATGATCAGAGT  482
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGCCAATAATACTACTGCATTTTTTTAGATTAAAAGCAATGATCAGAGT  497

seq1  ATGTAGTGTGCCCTAGGTTTGAGGACTTCATACACTTAAGGACATCCAAT  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTGTGCCCTAGGTTTGAGGACTTCATACACTTAAGGACATCCAAT  547

seq1  CTCTAGAATCTATAGAATTTCATCCAGTCTCCAGAGTCTATAGAATCAAG  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGAATCTATAGAATTTCATCCAGTCTCCAGAGTCTATAGAATCAAG  597

seq1  ATCTGAAAGTCAATATGAATATTTTAGCAGAGAAAAATATGTAAATCTTA  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAAGTCAATATGAATATTTTAGCAGAGAAAAATATGTAAATCTTA  647

seq1  GACAATGAGTGGTAAAGCATCAAGAAAGTGGATGCTCACAGTCAGCTATT  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAGTGGTAAAGCATCAAGAAAGTGGATGCTCACAGTCAGCTATT  697

seq1  GGATGGATCACAGGACCCCCAATGGAGGAACTAGAAAAAGTACCCAAGGA  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGATCACAGGACCCCCAATGGAGGAACTAGAAAAAGTACCCAAGGA  747

seq1  GCTAAAGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCTGT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACCTGT  797

seq1  ACTCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAGAAGATAGCCTAG  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAGAAGATAGCCTAG  847

seq1  TCAGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTATATGC  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCATCACTGGAAAGAGAGGCCCATTGGACATGCAAACTTTATATGC  897

seq1  CCTAGTACAGGGGAACACCAGGGGCAAAAAGTGGGAGTGGGTGGGGAGGG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTACAGGGGAACACCAGGGGCAAAAAGTGGGAGTGGGTGGGGAGGG  947

seq1  GGTTGGGGGAGAGGGTATCGGGGACTTTTGGGATAGCATTGGAAATGTAA  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGGGGAGAGGGTATCGGGGACTTTTGGGATAGCATTGGAAATGTAA  997

seq1  ATGAGGAAAATACCTAATAAAAATATATAAAAAAGAATTAAAATGGATCA  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAAAATACCTAATAAAAATATATAAAAAAGAATTAAAATGGATCA  1047

seq1  GTAAGTATTACTGGATGTCTGGTGCTTAGTGTCTAGATTTGTGTTTCCTT  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTATTACTGGATGTCTGGTGCTTAGTGTCTAGATTTGTGTTTCCTT  1097

seq1  AGGTTTTTTTGGGTTTTCTTTTTGTCATATTCAAAGAATTGGGGGTGAAA  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTTTGGGTTTTCTTTTTGTCATATTCAAAGAATTGGGGGTGAAA  1147

seq1  GCTGCATGCAGAATTC  1148
      ||||||||||||||||
seq2  GCTGCATGCAGAATTC  1163

seq1: chr16_75020268_75021341
seq2: B6Ng01-301F15.g_67_1138

seq1  GAATTCCCTGTAGTCAAGGGGGTCACATCAATGTTCTAGCTTACAATTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTAGTCAAGGGGGTCACATCAATGTTCTAGCTTACAATTAA  50

seq1  GAATAGTTTTATGGATGCCAAATAACCATTGACAAATCAGCTTTAATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTTTTATGGATGCCAAATAACCATTGACAAATCAGCTTTAATATT  100

seq1  ACAAAATAAAAACTCACTTAATGTGTATATTTTGTTGTATAGTAAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATAAAAACTCACTTAATGTGTATATTTTGTTGTATAGTAAGGTTT  150

seq1  AAACATCTTTTCAAAGAAAGCATGTAATATAAATGTCCTTGGATAGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTTTTCAAAGAAAGCATGTAATATAAATGTCCTTGGATAGGAAT  200

seq1  TTTTACATGTATTTAACATGTATGTATTTTTAGAATACTTCAACATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACATGTATTTAACATGTATGTATTTTTAGAATACTTCAACATTATT  250

seq1  CAATTTGGCAAATATAAGCATTATTCCCAACTGTCTTCCCATTATATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGCAAATATAAGCATTATTCCCAACTGTCTTCCCATTATATCTA  300

seq1  ATTTTCAACATAGCATACATTAAAAATATGCTTGTAGAATAATGTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAACATAGCATACATTAAAAATATGCTTGTAGAATAATGTTTGTT  350

seq1  AAAGTAATCTGTTAAAATAGGAATGAAAGGAAGGAATGTTTTCTGGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATCTGTTAAAATAGGAATGAAAGGAAGGAATGTTTTCTGGAATT  400

seq1  TCCAGGTACCGTATCCATCTAATTTGATTGAGGTGTAAAAGTATTGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTACCGTATCCATCTAATTTGATTGAGGTGTAAAAGTATTGTAAA  450

seq1  AGGTTATATTGTTCATTGTTAGAGTTCTTTTCTACCGGTTTATATATAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATATTGTTCATTGTTAGAGTTCTTTTCTACCGGTTTATATATAGG  500

seq1  ATGCACAATTATTTTGAACATTATAGGTATTCTTATACATTACTTGACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAATTATTTTGAACATTATAGGTATTCTTATACATTACTTGACCA  550

seq1  ATCCTACTCAGAGTATTATTGACAATATCCTGCTCAGTGGTGCTCTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACTCAGAGTATTATTGACAATATCCTGCTCAGTGGTGCTCTAAAA  600

seq1  ACCATGTTCAGCAAAATAATATCAACATTATTATACATCACATACTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTTCAGCAAAATAATATCAACATTATTATACATCACATACTGTGA  650

seq1  AAACGATAAAGAACTGAAATATATTGGTAAATGTATACTATGATGTCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGATAAAGAACTGAAATATATTGGTAAATGTATACTATGATGTCTGA  700

seq1  TCACTGGGAAACCATTCTATATAAAAACAAGTATCCCTAATCAAGTCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGGAAACCATTCTATATAAAAACAAGTATCCCTAATCAAGTCAAT  750

seq1  TATTTTTTTATATTTATATTTATATGTTTTTAGATGTTATAACTAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTATATTTATATTTATATGTTTTTAGATGTTATAACTAATATT  800

seq1  AATTTATCCCTTCTAATTTCTAATCTTCTTGCCATTTTGCATGAATTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATCCCTTCTAATTTCTAATCTTCTTGCCATTTTGCATGAATTTGT  850

seq1  CCATCAACTTTCATTAATATATTTTATTAGCCTTATGACTCTTTTGTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCAACTTTCATTAATATATTTTATTAGCCTTATGACTCTTTTGTACT  900

seq1  GTCTACATCAATGAAATAACAATTGAAGTAACTTCATATTAGATTTCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACATCAATGAAATAACAATTGAAGTAACTTCATATTAGATTTCACT  950

seq1  GAAGACTATGGAGTTATACAGTGTAACACAG-AAAACACTGTTAATTCTG  999
      ||||||||||||||||||||||||||||||| ||||||||||| ||||||
seq2  GAAGACTATGGAGTTATACAGTGTAACACAGAAAAACACTGTT-ATTCTG  999

seq1  ATATAAAATATCATTGGATA-TGTAGTTTAGTAATAATATATTAAAGAGA  1048
      ||   ||||||||||||||| ||||||||||| |||||||  | ||||||
seq2  ATTATAAATATCATTGGATATTGTAGTTTAGT-ATAATATTATGAAGAGA  1048

seq1  TTAAAAGTAAACAAAATTCCTTTCTC  1074
      || ||||| ||| || ||||||||||
seq2  TT-AAAGTTAAC-AATTTCCTTTCTC  1072