BAC Information

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BAC

Clone NameB6Ng01-302J21
Chromosome16 (Build37)
Map Location 16,577,677 - 16,578,473
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4
Downstream geneOlfr19, 4933404G15Rik, Spag6, EG665562, EG436405, Vpreb1, Top3b, Ppm1f, LOC100042783, EG623519, Mapk1, Ypel1, Ppil2, 2610318N02Rik, Sdf2l1, LOC623568, Ccdc116, 1810015A11Rik, Ube2l3, Gm603, Hic2, D16Bwg1494e, Pik4ca, Serpind1, Snap29, Crkl, Aifm3, Lztr1, Thap7, 4930451C15Rik, P2rxl1, Slc7a4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-302J21.bB6Ng01-302J21.g
ACCGA096620GA096621
length979797
definitionB6Ng01-302J21.b B6Ng01-302J21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttccgcatctaaggaaatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgctggattttcgtatattaaacc
attagttagtttcactgtgtccctgtttagtttctgtttccacgatctgt
ccattgatgaaagtgttgtgttgaagtctcccactattattgtgtgaggt
gcaatgtgtgctttgagctttactaaagtgtctttaatgaatgtggctgc
ccttgcatttggagcatagatattcagaatttagagttcctcttggagga
ttttacctttgatgagtatgaagtgtccctccttgtcttttttgataact
ttgggttggaattcgattttatctgatattagaatggctactccagcttg
tttcttcagaccattgcttggaaatttgttttccagcctttcactctgag
gtagtgtctgtctttttccctgagatgggtttcctgtaagcagcagaatg
ttgggtcctgtttgtgtagccattctgttagtctatgtctttttattggg
gaattgagtccattgatattaagagatattaaggaaaagtaattgttgct
tccttttatttttgttgttagagttggcattctgttcttgtggctgtctt
ctttttggtttgttgagggattactttcttgcttgttctagggcgtgatt
tccgtccttgtattgcttcttttctgttattatcctttgaagggctggat
tcatggaaagatattgtgtgaatttggttttgtcgtggaatactttgggt
ttctccatctatggtaattgagagtttggccgggtatagtagcctgggct
ggcatttgtgttctcttagtgtctgtataacatctgtccaggctcttctg
gctttcatagtctctggtgaaaagtctgg
gaattctaagttcatctttaatggatgggggtgggggttttatgtgtttt
cctttcatttttgtttcctctcagtctttgacctgagtggtttggggttc
tgatcaccagtgcacttacatgtctagtaggatgtcttccctggggtttt
gtatcctgcgtagcctctgagttttggggtgctaatggtgcctctggggt
ccctagtactagtgtggcctagggttcctggtgccagagtggcctcctgg
aaagcaggcagggacctggagtgagaaatggagtgtggggcacagttcat
cactggaaacaatcctagttttatttatcatttgtctctccttttatttc
tatattgactccccttctccctttccgttggagacctacttctcccattt
ttctgtttctctgcttcatatctcctgtacttcataaaatggaggaggag
tggatctgaggaagaaggaagatggagtaaaactagaagtgaaagagaaa
ctggtcaggatgcatgtataagagaagaatttaaaaaagaaagaaagaaa
aaaatcatgaattttgcaggtaaaccaattgttctagaaaagatcatatg
gagtgagataatccagacccaggaagacaactgttgcatggattcattca
tctgtagttcctactccaactcctctgaagtgagggaataacacaatatc
tgcaaaacaggaaagtataaaggaaccatggggttgtggaagttaagaga
tggagactagcagaatacagttgatttgtgtatgggggggcatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_16577677_16578473
seq2: B6Ng01-302J21.g_66_862 (reverse)

seq1  TCCCATGCCCCCCCATACACAAATCACCTGTATTCTGCTAGTCTCCATCT  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCCCATGCCCCCCCATACACAAATCAACTGTATTCTGCTAGTCTCCATCT  50

seq1  CTTAACTTCCACAACCCCATGGTTCCTTTATACTTTCCTGTTTTTGCAGA  100
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTAACTTCCACAACCCCATGGTTCCTTTATACTTTCCTG-TTTTGCAGA  99

seq1  TATTGTGTTATTCCCTCACTTCAGAGGAGTTGGAGTAGGAACTACAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTTATTCCCTCACTTCAGAGGAGTTGGAGTAGGAACTACAGATG  149

seq1  AATGAATCCATGCAACAGTTGTCTTCCTGGGTCTGG-TTATCTCACTCCA  199
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AATGAATCCATGCAACAGTTGTCTTCCTGGGTCTGGATTATCTCACTCCA  199

seq1  TATGATCTTTTCTGGAACAATTGGTTTACCTGCAAAATTCATGATTTTTT  249
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATGATCTTTTCTAGAACAATTGGTTTACCTGCAAAATTCATGATTTTTT  249

seq1  TCTTTCTTTCTTTTTTAAATTCTTCTCTTATACATGCATCCTGACCAGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTTTTAAATTCTTCTCTTATACATGCATCCTGACCAGTT  299

seq1  TCTCTTTCACTTCTAGTTTTACTCCATCTTCCTTCTTCCTCAGATCCACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCACTTCTAGTTTTACTCCATCTTCCTTCTTCCTCAGATCCACT  349

seq1  CCTCCTCCATTTTATGAAGTACAGGAGATATGAAGCAGAGAAACAGAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCATTTTATGAAGTACAGGAGATATGAAGCAGAGAAACAGAAAA  399

seq1  ATGGGAGAAGTAGGTCTCCAACGGAAAGGGAGAAGGGGAGTCAATATAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGAAGTAGGTCTCCAACGGAAAGGGAGAAGGGGAGTCAATATAGA  449

seq1  AATAAAAGGAGAGACAAATGATAAATAAAACTAGGATTGTTTCCAGTGAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGGAGAGACAAATGATAAATAAAACTAGGATTGTTTCCAGTGAT  499

seq1  GAACTGTGCCCCACACTCCATTTCTCACTCCAGGTCCCTGCCTGCTTTCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTGCCCCACACTCCATTTCTCACTCCAGGTCCCTGCCTGCTTTCC  549

seq1  AGGAGGCCACTCTGGCACCAGGAACCCTAGGCCACACTAGTACTAGGGAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCCACTCTGGCACCAGGAACCCTAGGCCACACTAGTACTAGGGAC  599

seq1  CCCAGAGGCACCATTAGCACCCCAAAACTCAGAGGCTACGCAGGATACAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGCACCATTAGCACCCCAAAACTCAGAGGCTACGCAGGATACAA  649

seq1  AACCCCAGGGAAGACATCCTACTAGACATGTAAGTGCACTGGTGATCAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCAGGGAAGACATCCTACTAGACATGTAAGTGCACTGGTGATCAGA  699

seq1  ACCCCAAACCACTCAGGTCAAAGACTGAGAGGAAACAAAAATGAAAGGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAAACCACTCAGGTCAAAGACTGAGAGGAAACAAAAATGAAAGGAA  749

seq1  AACACATAAAACCCCCACCCCCATCCATTAAAGATGAACTTAGAATTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATAAAACCCCCACCCCCATCCATTAAAGATGAACTTAGAATTC  797