BAC Information

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BAC

Clone NameB6Ng01-305G16
Chromosome16 (Build37)
Map Location 7,352,777 - 7,513,339
singlet/doubletdoublet
Overlap geneA2bp1
Upstream genenone
Downstream gene4930511J11Rik, BC024814
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-305G16.bB6Ng01-305G16.g
ACCGA098713GA098714
length1,171557
definitionB6Ng01-305G16.b B6Ng01-305G16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,352,777 - 7,353,942)(7,512,777 - 7,513,339)
sequence
gaattctctgcaaatgtctttcattttgcacaccctcatggtcagaaact
tctgacgttccctctgccatgctcaccaggttctgtttcaggtgtgcagc
acttgcgtttgcctttccatcttgctaatagagagtaggctgggttatct
catcttcttgccatgtaaacagggtccagaaaaatggtccttgccaggca
ggctacgtgtgcgtctcactgtgcctggctctctcccctctctcatagtg
cctggcttcccatatccggccgccactgctgcagctgcataccgaggggc
tcaccttcgaggccgtggtcgcaccgtgtacaacaccttcagggctgcag
cgcccccgcccccaatcccggcctatggcgggtaagtgttgcaccctccg
gggggaggggctccctgcacctgctctccctccccagaggcacggagtgt
ttgccaacgcatgatggtcttgaccaccctacctgaacctccccagcatg
cagcctaacctgcctgctgcaaagcaccttgcaaggagtattgaaaaatg
agtgtaatttgtctggtcatggttggtgcctttaagcattctacatgtca
catgttgttatgtaaattctctttgagactgaatgctggagaacagagaa
atggttacagccaaagatgtatttctgatgattgcaagcatctggttatt
aaggaggttggactgtatttaccccttgaatgcaaagggacatgaggttt
cccatatataagattcacaggggagattcttgcttcccgccgcccccccc
cctagacatttttgcactcctcgctgtgtgaacttttgcctgaaaaatta
ggtgttgaggcaaacaaaacatttccagacagggataaaatttacagttt
attttgccttttaccagcccttttccaaaacagcccatcctgccctttcc
cgttctcttttgcccacccaggccttctgtgattggatcttgtactgaca
gctaaaagtctaggaatggtggggagaaaagaaggaattgggagaatgga
cagaagggaaagaaagtgacttacttataggccaaacctacctgaatgat
acctcttgctcttccttatcgggaaatctgtaaggcattcctccatcccg
gaactataggagcgtacctct

agcgtgtcaaaggtgttcaaagtctttagaagcatacacaagaaaaactc
tttatatgtattatgaagtgtggttataatccaacgtcaaatagtgtgct
gtccacaagagaactagggatgaagaaaagcgtgagaacactggggataa
tggagtaatatttactcttccagtatttaaagcttagcccaaagtgctat
tgacaaagtgactcccatgtaatgagaataataaataccatgaagataat
gagctcagagtgagcctccaaaagggccaattgcgtattcaattattcta
aattgcttatctgcttcctatagattatgaattaggcctacttcttcagg
catggcaatggacttgagtttccacacacaagtcagtgtgcatgttgatg
tattgttcagttttcttttcttttctattttttattattattttcattgt
tttgcaggtactggcaaggacagtactacttcatgagttaatacttttta
acatttgttttttatgttgtattactatttgtgtgtgtgtgtgtgtgtgt
gtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7352777_7353942
seq2: B6Ng01-305G16.b_44_1214

seq1  GAATTCTCTGCAAATGTCTTTCATTTTGCACACCCTCATGGTCAGAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAAATGTCTTTCATTTTGCACACCCTCATGGTCAGAAACT  50

seq1  TCTGACGTTCCCTCTGCCATGCTCACCAGGTTCTGTTTCAGGTGTGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACGTTCCCTCTGCCATGCTCACCAGGTTCTGTTTCAGGTGTGCAGC  100

seq1  ACTTGCGTTTGCCTTTCCATCTTGCTAATAGAGAGTAGGCTGGGTTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCGTTTGCCTTTCCATCTTGCTAATAGAGAGTAGGCTGGGTTATCT  150

seq1  CATCTTCTTGCCATGTAAACAGGGTCCAGAAAAATGGTCCTTGCCAGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTTGCCATGTAAACAGGGTCCAGAAAAATGGTCCTTGCCAGGCA  200

seq1  GGCTACGTGTGCGTCTCACTGTGCCTGGCTCTCTCCCCTCTCTCATAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACGTGTGCGTCTCACTGTGCCTGGCTCTCTCCCCTCTCTCATAGTG  250

seq1  CCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCCCATATCCGGCCGCCACTGCTGCAGCTGCATACCGAGGGGC  300

seq1  TCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTTCGAGGCCGTGGTCGCACCGTGTACAACACCTTCAGGGCTGCAG  350

seq1  CGCCCCCGCCCCCAATCCCGGCCTATGGCGGGTAAGTGTTGCACCCTCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCCGCCCCCAATCCCGGCCTATGGCGGGTAAGTGTTGCACCCTCCG  400

seq1  GGGGGAGGGGCTCCCTGCACCTGCTCTCCCTCCCCAGAGGCACGGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGGGGCTCCCTGCACCTGCTCTCCCTCCCCAGAGGCACGGAGTGT  450

seq1  TTGCCAACGCATGATGGTCTTGACCACCCTACCTGAACCTCCCCAGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAACGCATGATGGTCTTGACCACCCTACCTGAACCTCCCCAGCATG  500

seq1  CAGCCTAACCTGCCTGCTGCAAAGCACCTTGCAAGGAGTATTGAAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTAACCTGCCTGCTGCAAAGCACCTTGCAAGGAGTATTGAAAAATG  550

seq1  AGTGTAATTTGTCTGGTCATGGTTGGTGCCTTTAAGCATTCTACATGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAATTTGTCTGGTCATGGTTGGTGCCTTTAAGCATTCTACATGTCA  600

seq1  CATGTTGTTATGTAAATTCTCTTTGAGACTGAATGCTGGAGAACAGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTTATGTAAATTCTCTTTGAGACTGAATGCTGGAGAACAGAGAA  650

seq1  ATGGTTACAGCCAAAGATGTATTTCTGATGATTGCAAGCATCTGGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTACAGCCAAAGATGTATTTCTGATGATTGCAAGCATCTGGTTATT  700

seq1  AAGGAGGTTGGACTGTATTTACCCCTTGAATGCAAAGGGACATGAGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTTGGACTGTATTTACCCCTTGAATGCAAAGGGACATGAGGTTT  750

seq1  CCCATATATAAGATTCACAGGGGAGA-TCTTGCTTCCCGCCG-CCCCCCC  798
      |||||||||||||||||||||||||| ||||||||||||||| |||||||
seq2  CCCATATATAAGATTCACAGGGGAGATTCTTGCTTCCCGCCGCCCCCCCC  800

seq1  CCTAGACATTTTTGCACTCCTCGCTGTGTGAACTTTTGCCTGAAAAATTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGACATTTTTGCACTCCTCGCTGTGTGAACTTTTGCCTGAAAAATTA  850

seq1  GGTGTTGAGGCAAACAAAACA-TTCCAGACAGGGATAAAA-TTACAG-TT  895
      ||||||||||||||||||||| |||||||||||||||||| |||||| ||
seq2  GGTGTTGAGGCAAACAAAACATTTCCAGACAGGGATAAAATTTACAGTTT  900

seq1  AATTTGCCTTTTACCAG-CCTTTTCCAAAACAGCCCATCCTGCCCTTTCC  944
      | ||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTTTGCCTTTTACCAGCCCTTTTCCAAAACAGCCCATCCTGCCCTTTCC  950

seq1  CGTTCTC-TTTGCCCACCCAGGCCTTCTGTGATTGGATCTTGTTACTGAC  993
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  CGTTCTCTTTTGCCCACCCAGGCCTTCTGTGATTGGATCTTG-TACTGAC  999

seq1  AGCTAAAAGTCTAGGAATGGTTGGGAAGAAAAGAAGGAA-TGGGAG-ATG  1041
      |||||||||||||||||||| |||| ||||||||||||| |||||| |||
seq2  AGCTAAAAGTCTAGGAATGG-TGGGGAGAAAAGAAGGAATTGGGAGAATG  1048

seq1  GACAG-AGGGAAAGAAAAGTTGACTAACTTATAGG-CAAACTACCCTGAA  1089
      ||||| |||||||||||   ||||| ||||||||| |||||   |||| |
seq2  GACAGAAGGGAAAGAAA--GTGACTTACTTATAGGCCAAACCTACCTG-A  1095

seq1  ATGATACTTC-TGCTCTTCCCTAATCGGGAATCTTGGAAGGGCATTCCTC  1138
      ||||||| || ||||||| ||| ||||||||   || || ||||||||||
seq2  ATGATACCTCTTGCTCTT-CCTTATCGGGAAATCTGTAA-GGCATTCCTC  1143

seq1  CACCCCGGACACAAAGAGAG-GTACCTCT  1166
      || |||||| || |   ||| ||||||||
seq2  CATCCCGGA-ACTATAGGAGCGTACCTCT  1171


seq1: chr16_7512777_7513339
seq2: B6Ng01-305G16.g_69_631 (reverse)

seq1  CACACACACACACACACACACACACACAAATAGTAATACAACATAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACAAATAGTAATACAACATAAAAAA  50

seq1  CAAATGTTAAAAAGTATTAACTCATGAAGTAGTACTGTCCTTGCCAGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTAAAAAGTATTAACTCATGAAGTAGTACTGTCCTTGCCAGTAC  100

seq1  CTGCAAAACAATGAAAATAATAATAAAAAATAGAAAAGAAAAGAAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAACAATGAAAATAATAATAAAAAATAGAAAAGAAAAGAAAACTG  150

seq1  AACAATACATCAACATGCACACTGACTTGTGTGTGGAAACTCAAGTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATACATCAACATGCACACTGACTTGTGTGTGGAAACTCAAGTCCAT  200

seq1  TGCCATGCCTGAAGAAGTAGGCCTAATTCATAATCTATAGGAAGCAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGCCTGAAGAAGTAGGCCTAATTCATAATCTATAGGAAGCAGATA  250

seq1  AGCAATTTAGAATAATTGAATACGCAATTGGCCCTTTTGGAGGCTCACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTTAGAATAATTGAATACGCAATTGGCCCTTTTGGAGGCTCACTC  300

seq1  TGAGCTCATTATCTTCATGGTATTTATTATTCTCATTACATGGGAGTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCATTATCTTCATGGTATTTATTATTCTCATTACATGGGAGTCAC  350

seq1  TTTGTCAATAGCACTTTGGGCTAAGCTTTAAATACTGGAAGAGTAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCAATAGCACTTTGGGCTAAGCTTTAAATACTGGAAGAGTAAATAT  400

seq1  TACTCCATTATCCCCAGTGTTCTCACGCTTTTCTTCATCCCTAGTTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATTATCCCCAGTGTTCTCACGCTTTTCTTCATCCCTAGTTCTCT  450

seq1  TGTGGACAGCACACTATTTGACGTTGGATTATAACCACACTTCATAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACAGCACACTATTTGACGTTGGATTATAACCACACTTCATAATAC  500

seq1  ATATAAAGAGTTTTTCTTGTGTATGCTTCTAAAGACTTTGAACACCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGAGTTTTTCTTGTGTATGCTTCTAAAGACTTTGAACACCTTTG  550

seq1  ACACGCTGAATTC  563
      |||||||||||||
seq2  ACACGCTGAATTC  563


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