BAC Information

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BAC

Clone NameB6Ng01-307M14
Chromosome16 (Build37)
Map Location 8,521,953 - 8,715,338
singlet/doubletdoublet
Overlap geneAbat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7
Upstream gene4930511J11Rik, BC024814
Downstream geneLOC665231, 1810013L24Rik, LOC100043106, Grin2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-307M14.bB6Ng01-307M14.g
ACCGA100465GA100466
length1,145199
definitionB6Ng01-307M14.b B6Ng01-307M14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,714,213 - 8,715,338)(8,521,953 - 8,522,151)
sequence
gaattcttagtactaagtactcatgctttatcacaatacctaagagtagc
agtggcccagcttgtcttttccaggttgggaaagcagagcggccagcggt
cctcttggtttgcagttggaagtgtcttcagcaaggcctgggcctgggcc
tgggtctatttacagcatggcagaggcaagggagggtggggctctgtttc
tggagcagatcttagggtgagcttttccggaagtaatgtgactctgaacc
gctggtgtaggttgtatgtgtcatgtggccaggtcagaaccttgggaaat
tcgaggagttctgcattacccatgcctcagctgtcccttagaaaccctgg
ggttttcttaatgatcccttagactctggctttgaacccctttacttaga
tctttttaaaatatatcaaactaggacacatgatctagaaaacattggat
cgaggccaatttgtaatcatatgatctgtgactttattgcgctcagggtt
cttagaggcgtctctcgtgtgagaacttgggtagcttggcagtgcagaca
ttagtggaggacactgcagatattagtggaggacacgtgtagttgaggaa
aagagcatatttttaaaatgcctgttaacagactaatggggtgggcaggt
ggtagagcctctttgttatcatatttctcatttcatcaagtactgcttgt
ccttagatgagaggttttagagcaaacacatgggctatgaggacctagat
aaagctgtgttaagttgtaggtgtctagaaacaacctatttcttaagagt
aacagacttgtaaaatttgtattagaataactagtatgtcagaaggtttg
agaagacatccctctagagtcactatatggagaaattagtcccttcaaaa
cctgaagtgtcctgtctgtgtgcttctctacagagttgaggccaggggca
gtccactcagagttttaagtggaatctaactcccactcccatggtgccac
tgttatttcattcttgggcagaggaccctggtcagaattgggtcaagtct
cgagggaattcccttttagggagggattaatcaggcaggcttaatttaag
tactggtgggatataggtttcaggcttctttaggctgttacaaat
tctacatggggtgagtagctcggaagcatgggtgatgctcacagaagctt
atacgtctcctcggcttcctggagtcctgtaagtctccctgtccttgctc
tgggaggagaaacaactacaaagaggctgaacaaacatagacagccataa
tttctgtcttgaggcatattgttggatgttggataggtgggtgggtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8714213_8715338
seq2: B6Ng01-307M14.b_46_1190 (reverse)

seq1  ATTTGTAACAGCCTAAGGAAACCTGAAACCTAT---CCA-CAGTAC-TAA  45
      |||||||||||||||| ||| ||||||||||||   ||| |||||| |||
seq2  ATTTGTAACAGCCTAAAGAAGCCTGAAACCTATATCCCACCAGTACTTAA  50

seq1  ATT-AGCCTG-CTGATTA--TCCTCC--TAAAGGGAATT-CCTCGAGAC-  87
      ||| |||||| |||||||   |||||   |||||||||| ||||||||| 
seq2  ATTAAGCCTGCCTGATTAATCCCTCCCTAAAAGGGAATTCCCTCGAGACT  100

seq1  TGACC--AATCTGACAAGGGT-CTCTGCCCAAGAATGAA--TACAGTGGC  132
      |||||  | |||||| ||||| |||||||||||||||||   ||||||||
seq2  TGACCCAATTCTGACCAGGGTCCTCTGCCCAAGAATGAAATAACAGTGGC  150

seq1  A-CATGGGAGTGGGAGTTAGA-TCCACTTAAAAACTCTGAGTGGACTG-C  179
      | ||||||||||||||||||| ||||||| |||||||||||||||||| |
seq2  ACCATGGGAGTGGGAGTTAGATTCCACTT-AAAACTCTGAGTGGACTGCC  199

seq1  CCTGGCCTCAACTCTGTAGAGAAAGCACACAGACAGGACACTTCAGGTTT  229
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTGGCCTCAACTCTGTAGAG-AAGCACACAGACAGGACACTTCAGGTTT  248

seq1  TGAAGGGACTAATTTCTCCATATAGTGACTCTAGAGGGATGTCTTCTCAA  279
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGACTAATTTCTCCATATAGTGACTCTAGAGGGATGTCTTCTCAA  298

seq1  ACCTTCTGACATACTAGTTATTCTAATACAAATTTTACAAGTCTGTTACT  329
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTGACATACTAGTTATTCTAATACAAATTTTACAAGTCTGTTACT  348

seq1  CTTAAGAAATAGGTTGTTTCTAGACACCTACAACTTAACACAGCTTTATC  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAAATAGGTTGTTTCTAGACACCTACAACTTAACACAGCTTTATC  398

seq1  TAGGTCCTCATAGCCCATGTGTTTGCTCTAAAACCTCTCATCTAAGGACA  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCTCATAGCCCATGTGTTTGCTCTAAAACCTCTCATCTAAGGACA  448

seq1  AGCAGTACTTGATGAAATGAGAAATATGATAACAAAGAGGCTCTACCACC  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTACTTGATGAAATGAGAAATATGATAACAAAGAGGCTCTACCACC  498

seq1  TGCCCACCCCATTAGTCTGTTAACAGGCATTTTAAAAATATGCTCTTTTC  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCACCCCATTAGTCTGTTAACAGGCATTTTAAAAATATGCTCTTTTC  548

seq1  CTCAACTACACGTGTCCTCCACTAATATCTGCAGTGTCCTCCACTAATGT  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACTACACGTGTCCTCCACTAATATCTGCAGTGTCCTCCACTAATGT  598

seq1  CTGCACTGCCAAGCTACCCAAGTTCTCACACGAGAGACGCCTCTAAGAAC  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGCCAAGCTACCCAAGTTCTCACACGAGAGACGCCTCTAAGAAC  648

seq1  CCTGAGCGCAATAAAGTCACAGATCATATGATTACAAATTGGCCTCGATC  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCGCAATAAAGTCACAGATCATATGATTACAAATTGGCCTCGATC  698

seq1  CAATGTTTTCTAGATCATGTGTCCTAGTTTGATATATTTTAAAAAGATCT  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTTCTAGATCATGTGTCCTAGTTTGATATATTTTAAAAAGATCT  748

seq1  AAGTAAAGGGGTTCAAAGCCAGAGTCTAAGGGATCATTAAGAAAACCCCA  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGGGGTTCAAAGCCAGAGTCTAAGGGATCATTAAGAAAACCCCA  798

seq1  GGGTTTCTAAGGGACAGCTGAGGCATGGGTAATGCAGAACTCCTCGAATT  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTAAGGGACAGCTGAGGCATGGGTAATGCAGAACTCCTCGAATT  848

seq1  TCCCAAGGTTCTGACCTGGCCACATGACACATACAACCTACACCAGCGGT  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGTTCTGACCTGGCCACATGACACATACAACCTACACCAGCGGT  898

seq1  TCAGAGTCACATTACTTCCGGAAAAGCTCACCCTAAGATCTGCTCCAGAA  929
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTCACATTACTTCCGGAAAAGCTCACCCTAAGATCTGCTCCAGAA  948

seq1  ACAGAGCCCCACCCTCCCTTGCCTCTGCCATGCTGTAAATAGACCCAGGC  979
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCCCACCCTCCCTTGCCTCTGCCATGCTGTAAATAGACCCAGGC  998

seq1  CCAGGCCCAGGCCTTGCTGAAGACACTTCCAACTGCAAACCAAGAGGACC  1029
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCCAGGCCTTGCTGAAGACACTTCCAACTGCAAACCAAGAGGACC  1048

seq1  GCTGGCCGCTCTGCTTTCCCAACCTGGAAAAGACAAGCTGGGCCACTGCT  1079
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCGCTCTGCTTTCCCAACCTGGAAAAGACAAGCTGGGCCACTGCT  1098

seq1  ACTCTTAGGTATTGTGATAAAGCATGAGTACTTAGTACTAAGAATTC  1126
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAGGTATTGTGATAAAGCATGAGTACTTAGTACTAAGAATTC  1145

seq1: chr16_8521953_8522151
seq2: B6Ng01-307M14.g_71_269

seq1  TCTACATGGGGTGAGTAGCTCGGAAGCATGGGTGATGCTCACAGAAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGGGGTGAGTAGCTCGGAAGCATGGGTGATGCTCACAGAAGCTT  50

seq1  ATACGTCTCCTCGGCTTCCTGGAGTCCTGTAAGTCTCCCTGTCCTTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGTCTCCTCGGCTTCCTGGAGTCCTGTAAGTCTCCCTGTCCTTGCTC  100

seq1  TGGGAGGAGAAACAACTACAAAGAGGCTGAACAAACATAGACAGCCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAGAAACAACTACAAAGAGGCTGAACAAACATAGACAGCCATAA  150

seq1  TTTCTGTCTTGAGGCATATTGTTGGATGTTGGATAGGTGGGTGGGTAGA  199
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCTTGAGGCATATTGTTGGATGTTGGATAGGTGGGTGGGTAGA  199