BAC Information

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BAC

Clone NameB6Ng01-310K06
Chromosome16 (Build37)
Map Location 13,031,645 - 13,032,775
singlet/doubletsinglet
Overlap genenone
Upstream gene2700045P11Rik, EG622509, LOC622553
Downstream geneErcc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3, Ntan1, Pdxdc1, Mpv17l, Ifitm7, 2900011O08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310K06.bB6Ng01-310K06.g
ACCGA102563GA102564
length1,1331,177
definitionB6Ng01-310K06.b B6Ng01-310K06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggtgcccgtgttgggggtgagagtggaggcatcgggacacagg
cacatggcagcttgaccttgtctcattgcctgatcaaggtttctggctct
tcttacctttgcctaagcagaagtgtcagactctgtcaggagccatagca
ggagaaaagggaaggaaacatgctaggcactgaggacagagaagctgact
gcacacacgagcaaggaagcaccttcccgcccctcttggcagccaggtaa
agcactctttcacctctgtccatctctgttccaggggaacagctgagcga
cggccaataaggagccaatattttccccagaatgttttcaaagagttcta
aagcattggaacgaattccaattttacagtggattgaccagtcctattga
ttttcctctgttcatttctataaagattttccttattgtatgttgttctg
cctgcatgtatgtatgtgcaccagatcctcatgtaactgtagttacagat
agttgtggactgccatttggttgccaggaaccaaaacctcaggaactctt
gaatagaagtaagtacccttgactggtgaaccaatcatctcttcaaacta
ccacccacttccttttatacttttactatttttcatgatagaagccaaat
atttgacttccaagacttttgcagctaggggtaggacatggagcatagta
caaaaagtagaaggttgagtggatattctgagaactgtcttatttcaatg
gttgaaaggtagccttaagacagataatattatagggaaagagcctcctt
gtgatcataaaggcaagagaagaacaaacatacaaactcagacttggctg
aagcaccaagtcatactctccagagacaatgtgagtcccattctctttct
ccttcctgttcaagtttccaacaagtagaaaataaatatgaattctaata
ggtgggttttcttatcattttttaaaaacacatattatattgtaacccct
aagtttgcctgattccccccattgagatttaaatgggctttttgagaatt
atagtcagaccaccagttcttctgactgaaaagtcaaaaagtttatataa
actatttcataaagatattctttcagaggaagt
gaattccatgcatagactcagatatttaaatgtttgttcccatttggtgg
aacttaggaagtgtgacttggttggagtaggtgtgttactggatgtggac
ttagagatttcaaaagtccatatcattcccagctctatctgtctctgcct
cagatgtgtggagagccgtgccgcgagcaatcgccattataagatggcgc
tggcttccgctgtgcctaactagtaaacaagccttgtgcgcaagtgcgag
agtgaactcacgcctagtcactgcccatctggggcatagtaatgaggtga
tgggcgagcaacaaatcaggagctgtcacgccacatcaggtgctgaaacg
ccacgctgagggctatataagcagcaccattttcttttccggggtctggg
tcttccctccttaaaaagcaataaagcttgccgcagaagaatccggttgt
ccgagtgtgttcttgccggcgagaacaatagctcgggacacagatgtaaa
cacttgagtgtacgagcatgtgcctgcctgtgctccctgctatgatggcc
atggaggcctaaattcaatgctttcttttgtaagtgcctttggtcatgat
gtctcctcacagcaatggaaaagtaactaagacactggtgaagttgtgga
aaataagggctggtccattaaggtcagctgtcatagccccatcctggtac
tggatctgccttcagtgagacctgtagccttttgttctcccatacagctt
ccttacagggttcccatacttttctcctaggtagtcaaacagggtggaaa
acttttctgcatccatgggcctccattgcctttagttcaacttatgccta
gcactgactgctttattatagactaggcattttggtatgtgcttggaatt
ccagcactagggaggtggtacaaaaagatctttgtggctcactgaacagt
cagtctagtttaattcatgagtctcagatctcagtgagagatgatgtctc
aaaaacagataaaaagctctaaagaatgataccgaggggtgacttctagt
ctctttatgcacatgcagacatggcttctcacatagtgattgcacctgct
ctccttaccagagttctctagttcagtatgtagaactactgtaatgcagc
cagtatggaagggacaaaaaatttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_13031645_13032775
seq2: B6Ng01-310K06.b_49_1181

seq1  GAATTCTGGTGCCCGTGTTGGGGGTGAGAGTGGAGGCATCGGGACACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGTGCCCGTGTTGGGGGTGAGAGTGGAGGCATCGGGACACAGG  50

seq1  CACATGGCAGCTTGACCTTGTCTCATTGCCTGATCAAGGTTTCTGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGCAGCTTGACCTTGTCTCATTGCCTGATCAAGGTTTCTGGCTCT  100

seq1  TCTTACCTTTGCCTAAGCAGAAGTGTCAGACTCTGTCAGGAGCCATAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTTTGCCTAAGCAGAAGTGTCAGACTCTGTCAGGAGCCATAGCA  150

seq1  GGAGAAAAGGGAAGGAAACATGCTAGGCACTGAGGACAGAGAAGCTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGGGAAGGAAACATGCTAGGCACTGAGGACAGAGAAGCTGACT  200

seq1  GCACACACGAGCAAGGAAGCACCTTCCCGCCCCTCTTGGCAGCCAGGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACGAGCAAGGAAGCACCTTCCCGCCCCTCTTGGCAGCCAGGTAA  250

seq1  AGCACTCTTTCACCTCTGTCCATCTCTGTTCCAGGGGAACAGCTGAGCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTTTCACCTCTGTCCATCTCTGTTCCAGGGGAACAGCTGAGCGA  300

seq1  CGGCCAATAAGGAGCCAATATTTTCCCCAGAATGTTTTCAAAGAGTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCAATAAGGAGCCAATATTTTCCCCAGAATGTTTTCAAAGAGTTCTA  350

seq1  AAGCATTGGAACGAATTCCAATTTTACAGTGGATTGACCAGTCCTATTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTGGAACGAATTCCAATTTTACAGTGGATTGACCAGTCCTATTGA  400

seq1  TTTTCCTCTGTTCATTTCTATAAAGATTTTCCTTATTGTATGTTGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCTGTTCATTTCTATAAAGATTTTCCTTATTGTATGTTGTTCTG  450

seq1  CCTGCATGTATGTATGTGCACCAGATCCTCATGTAACTGTAGTTACAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGTATGTATGTGCACCAGATCCTCATGTAACTGTAGTTACAGAT  500

seq1  AGTTGTGGACTGCCATTTGGTTGCCAGGAACCAAAACCTCAGGAACTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGGACTGCCATTTGGTTGCCAGGAACCAAAACCTCAGGAACTCTT  550

seq1  GAATAGAAGTAAGTACCCTTGACTGGTGAACCAATCATCTCTTCAAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGAAGTAAGTACCCTTGACTGGTGAACCAATCATCTCTTCAAACTA  600

seq1  CCACCCACTTCCTTTTATACTTTTACTATTTTTCATGATAGAAGCCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCACTTCCTTTTATACTTTTACTATTTTTCATGATAGAAGCCAAAT  650

seq1  ATTTGACTTCCAAGACTTTTGCAGCTAGGGGTAGGACATGGAGCATAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTTCCAAGACTTTTGCAGCTAGGGGTAGGACATGGAGCATAGTA  700

seq1  CAAAAAGTAGAAGGTTGAGTGGATATTCTGAGAACTGTCTTATTTCAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGTAGAAGGTTGAGTGGATATTCTGAGAACTGTCTTATTTCAATG  750

seq1  GTTGAAAGGTAGCCTTAAGACAGATAATATTATAGGGAAAGAGCCTCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAGGTAGCCTTAAGACAGATAATATTATAGGGAAAGAGCCTCCTT  800

seq1  GTGATCATAAAGGCAAGAGAAGAACAAACATACAAACTCAGACTTGGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATAAAGGCAAGAGAAGAACAAACATACAAACTCAGACTTGGCTG  850

seq1  AAGCACCAAGTCATACTCTCCAGAGACAATGTGAGTCCCATTCTCTTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCAAGTCATACTCTCCAGAGACAATGTGAGTCCCATTCTCTTTCT  900

seq1  CCTTCCTGTTCAAGTTTCCAACAAGTAGAAAATAAATATGAATTCTAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGTTCAAGTTTCCAACAAGTAGAAAATAAATATGAATTCTAATA  950

seq1  GGTGGGTTTTCTTATCATTTTTTAAAAACAACATATTATATTGTAACCCC  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTGGGTTTTCTTATCATTTTTTAAAAAC-ACATATTATATTGTAACCCC  999

seq1  TAAGTTTGCCTGATTCCCCCCATTGAGATTTAAATGGGCTTTTTTGAGA-  1049
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  TAAGTTTGCCTGATTCCCCCCATTGAGATTTAAATGGGC-TTTTTGAGAA  1048

seq1  -TATAGTCAGACCACCAGTTC-TCTGAACTGAAAAGGTTCAAAAAGTT--  1095
       |||||||||||||||||||| |||| |||||||||  ||||||||||  
seq2  TTATAGTCAGACCACCAGTTCTTCTG-ACTGAAAAG--TCAAAAAGTTTA  1095

seq1  TATAAACTATTTCATAAAGATAT--CTTCAGAGGAAGT  1131
      |||||||||||||||||||||||   ||||||||||||
seq2  TATAAACTATTTCATAAAGATATTCTTTCAGAGGAAGT  1133