BAC Information

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BAC

Clone NameB6Ng01-316H20
Chromosome16 (Build37)
Map Location 71,318,139 - 71,319,293
singlet/doubletsinglet
Overlap genenone
Upstream geneGbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316H20.bB6Ng01-316H20.g
ACCGA106873GA106874
length1,1511,206
definitionB6Ng01-316H20.b B6Ng01-316H20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgctttgatgtttcctggttctagctgctcactgcattcctt
ggcttttgacctctactgccttcaaagacagcaatgactagtcaaacttc
tttcatgtcgtctcacatgggtactgaatcactcttctcatagagacttc
tgggattccagtgcaatctgtctactaaattcaggtgctcagcaccttta
tcccatctgtctccttaattcccctctgccacaggtcctagcagattaaa
acaacttggatgacagcaggaagaggtctgtgacagcttctgtcacccta
ggtaacaccttgctgatttaaacatatactttccattccagaatagcatg
ttgtgtccttaaatcacatcctatagtaaggtaaatttaagttatgaaac
atctccatctgtgctattcactctgagtgctatgcttattaaattcatag
atactggctcactcatcataaccaaagacatctttatgatatcctttgag
ccaatatcagagtgtcataggccaaactcaaaaccactacagtactctga
aagtaaagtatgactcaattggtcgctctcctagcatatttggaggtttt
ttgcatccttcattttaacacctgttcagtaaatatgtctgctttgtaca
acaaaatgcccgagacttaattttttcaaattagcattaagctattatta
ctattatttatgtgaataattctttgctcttctaaacaaactctcttgta
tgtaatcaacagtttcccattgtcttcattccaaatgctgtaatataatg
attgaatgtcattagtaaagcaattgtaatcaactgatcagtgaactctt
aggagctcctaaacaatttccaaataggtgcaaaaaacaaatgaaaatta
atcattataattactgcaaccttgtgaaatcaaaattaaagatatcttat
acacttaaggtagcatataactgtgaatacatggagaaaattgttgttat
tctgatcactattttatcttttttctaagtagaaccaactgaagataaac
tagggatacatctgggtctgtctggtgctaggatctctaaaccttaaccc
atgctctagtcaatgatcgaaatattatttactctgataggcatcggatg
g
gaattctaaagaaagaattctcaactgaggaatactgaatggctgagaag
cacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaa
aacatccttgagattccacctcacaccagtcagaatggcaaagatcaaaa
actcaggtatcagcagatgctggcaaggatgtggagaaagaggaacactc
ctccattgatggtgagatcgcaagctggtacaaccactctggaaatcagt
ttgatggttcctcataaaattagtcatagttctactgcaagatccagtaa
taccattcctgggcatacacctagaagatgttctaccatgtaattaggac
acatttatttcataatgcctgcttgtttcattatttctctgtatcaatga
tctggcccttggtaagagtagggtgttagagtctctacagttaatgtgca
gtgtttgatgtgttatttaagctttggtaatgcaccttttacacatatgt
gtgaccttgcattttgggacatatattttcagagttgagatgttattatt
tgtggattttgagtagaaagtgtcctcctccatctgttgtgattaatatt
tgctgaaagtctattttgttagaaattagaatggatgctccagcttgctt
catgcatctttttgcttggaaaaattttttccaaccctttactctgaggt
aatgaatatctttgttgctgaagtgtgtttcttgtatgcagtagaatgat
ggatcctgttttctcatctatatggttaaacaaaggtcataaaaggggaa
ctaaggatttattagaggtgctaggacagaagataaaatattgattgggt
ttaatccatacaaaactttactaataacttagtaatggttttcaacctcc
tatgaatctgtggagctatacagatgatggatgtttcctaatggatatgc
ttttgcaaacattctctgctgcaaactatttcaatttatgattttgtgtg
aacttgtgatgactttaaacatatgatcatgtattctggagagatgtata
agtactggaggatggctcacagcaatccattggactgagcatgcagattc
tcattgcactacttgagaacgatcctcaggaacctgaaggtgccagccta
tagagaacatgcatattgtaatcaatcgcaggtacaccctcgaatgagac
gtctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71318139_71319293
seq2: B6Ng01-316H20.b_48_1198 (reverse)

seq1  CCATTCGATGCCTACCAAGATGTAATAATATTTCGATCAATGAATTAGAG  50
      |||| ||||||||| | |||   |||||||||||||||| || | |||||
seq2  CCATCCGATGCCTATC-AGAGTAAATAATATTTCGATCATTG-ACTAGAG  48

seq1  CATGGGTTTAGGTTTAGAGGATCTTAAGCA-CAGACAGA-CCAGATTGTT  98
      |||||||| ||||||||| |||| | |||| |||||||| ||||||   |
seq2  CATGGGTTAAGGTTTAGA-GATCCT-AGCACCAGACAGACCCAGAT--GT  94

seq1  ATTCCTAGTTTATCTTCAGTTGGTTCTACTTAG-AAAAAGATAAAATAGT  147
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATCCCTAGTTTATCTTCAGTTGGTTCTACTTAGAAAAAAGATAAAATAGT  144

seq1  GATCAGAATAACAACAATTTTCTCCATGTATTCACAGTTATATGCTACCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGAATAACAACAATTTTCTCCATGTATTCACAGTTATATGCTACCT  194

seq1  TAAGTGTATAAGATTATCTTTAATTTTGATTTCACAAGGTTGCAGTAATT  247
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTATAAGA-TATCTTTAATTTTGATTTCACAAGGTTGCAGTAATT  243

seq1  ATAATGATTAATTTTCATTTGTTTTTTGCACCTATTTGGAAATTGTTTAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATTAATTTTCATTTGTTTTTTGCACCTATTTGGAAATTGTTTAG  293

seq1  GAGCTCCTAAGAGTTCACTGATCAGTTGATTACAATTGCTTTACTAATGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTAAGAGTTCACTGATCAGTTGATTACAATTGCTTTACTAATGA  343

seq1  CATTCAATCATTATATTACAGCATTTGGAATGAAGACAATGGGAAACTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATCATTATATTACAGCATTTGGAATGAAGACAATGGGAAACTGT  393

seq1  TGATTACATACAAGAGAGTTTGTTTAGAAGAGCAAAGAATTATTCACATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACATACAAGAGAGTTTGTTTAGAAGAGCAAAGAATTATTCACATA  443

seq1  AATAATAGTAATAATAGCTTAATGCTAATTTGAAAAAATTAAGTCTCGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAGTAATAATAGCTTAATGCTAATTTGAAAAAATTAAGTCTCGGG  493

seq1  CATTTTGTTGTACAAAGCAGACATATTTACTGAACAGGTGTTAAAATGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTGTACAAAGCAGACATATTTACTGAACAGGTGTTAAAATGAA  543

seq1  GGATGCAAAAAACCTCCAAATATGCTAGGAGAGCGACCAATTGAGTCATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAAAAAACCTCCAAATATGCTAGGAGAGCGACCAATTGAGTCATA  593

seq1  CTTTACTTTCAGAGTACTGTAGTGGTTTTGAGTTTGGCCTATGACACTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTCAGAGTACTGTAGTGGTTTTGAGTTTGGCCTATGACACTCT  643

seq1  GATATTGGCTCAAAGGATATCATAAAGATGTCTTTGGTTATGATGAGTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTGGCTCAAAGGATATCATAAAGATGTCTTTGGTTATGATGAGTGA  693

seq1  GCCAGTATCTATGAATTTAATAAGCATAGCACTCAGAGTGAATAGCACAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATCTATGAATTTAATAAGCATAGCACTCAGAGTGAATAGCACAG  743

seq1  ATGGAGATGTTTCATAACTTAAATTTACCTTACTATAGGATGTGATTTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGATGTTTCATAACTTAAATTTACCTTACTATAGGATGTGATTTAA  793

seq1  GGACACAACATGCTATTCTGGAATGGAAAGTATATGTTTAAATCAGCAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAACATGCTATTCTGGAATGGAAAGTATATGTTTAAATCAGCAAG  843

seq1  GTGTTACCTAGGGTGACAGAAGCTGTCACAGACCTCTTCCTGCTGTCATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTACCTAGGGTGACAGAAGCTGTCACAGACCTCTTCCTGCTGTCATC  893

seq1  CAAGTTGTTTTAATCTGCTAGGACCTGTGGCAGAGGGGAATTAAGGAGAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTGTTTTAATCTGCTAGGACCTGTGGCAGAGGGGAATTAAGGAGAC  943

seq1  AGATGGGATAAAGGTGCTGAGCACCTGAATTTAGTAGACAGATTGCACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGGATAAAGGTGCTGAGCACCTGAATTTAGTAGACAGATTGCACTG  993

seq1  GAATCCCAGAAGTCTCTATGAGAAGAGTGATTCAGTACCCATGTGAGACG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCCAGAAGTCTCTATGAGAAGAGTGATTCAGTACCCATGTGAGACG  1043

seq1  ACATGAAAGAAGTTTGACTAGTCATTGCTGTCTTTGAAGGCAGTAGAGGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAAGAAGTTTGACTAGTCATTGCTGTCTTTGAAGGCAGTAGAGGT  1093

seq1  CAAAAGCCAAGGAATGCAGTGAGCAGCTAGAACCAGGAAACATCAAAGCA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCAAGGAATGCAGTGAGCAGCTAGAACCAGGAAACATCAAAGCA  1143

seq1  ATGAATTC  1155
      ||||||||
seq2  ATGAATTC  1151