BAC Information

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BAC

Clone NameB6Ng01-317G19
Chromosome16 (Build37)
Map Location 83,083,992 - 83,223,562
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665260
Downstream geneEG545172, LOC100039572, EG621729
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-317G19.bB6Ng01-317G19.g
ACCGA107571GA107572
length1,182977
definitionB6Ng01-317G19.b B6Ng01-317G19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,222,346 - 83,223,562)(83,083,992 - 83,084,966)
sequence
gaattcttatatgtaggttttgtcacagcattgctgcttttctggtcctc
caggcacactgatggacattttgttccatgctttcaaaggctgaagctat
gttataaaaaattcagagatatcagtttctggtttgtgtaacctatagct
tatttcctgtaatagtgtccattgttctccatcttctttgtttttagaga
ccatttacaaattatctttatgttctcaacactagatctatgcactgcca
ttcctaaagttgcattttagctttaccatagttcatatttccaaacaaaa
gtttttctggttgaattcctggggaggatgcatacttggcagacatctag
ttcatttgtctgaagcctctgtgtcaatagtctcgcaatctcttaggagc
tttgcttcttctggttgtacagtgggcattcaaacatgttaagttattat
gtgaataatctcagatataaaaccaaacataaaaacaaaaatgttgttta
tccacaccgagtttactgagagtcactttacagtgagcctgaggaaatga
agagcaacaaaccaagaagaatgatgttttcaaacctacagaactcttac
aggctttcattgtctttctgcctacatttgtctttattgagccctcaatc
acaatttggttattgggtttctctgtgctattccatccaggaagagctgt
ataaaagtcttatggtgtagttcaaatggccgaacaattctgtaatgaca
gctcctaaaccatgagtcatgaaagctgactatgttttgtttgcatgcat
atacatatatgctttaaaataaaatactagaatgtttagtttaaaatgtt
ttaatcatgataggatactttctacaatgcacactataaattatgatcat
ttgggagattgtttctactggataaactgagagattactatacctctagg
aaaaacatagacagttgcaaacatatttgaatactttacaaaggaaaaaa
tacatgagatgactcagacctgacttctgatttataaatgcctcatggta
gattttatattatattatccaaatctagcataaactaaggaatttaagaa
ccacttagtttcgttatactcataaagtaactagaagtacttcccaaatt
tatcagttaatcatgactctatcaatagtact

gaattcttttcttttatgattctataagatgttctacacctatcatctta
tgtaaataacttatttgttaagatacgataaataaaagaatcaatataaa
aagttctttgactgctcgtgataactataaaaatgggataaatttgtttt
gaaggtaattactgattcattctatcttacaaataatatttcagagaaaa
ataacatagtattagtaattctttaatttcagttatttattattcacaac
taccgttgcagaaaactctgggtaattttttgttgttgttgttgttgttt
gtttgtttgtttgtttgtttttcatttttcgttttcgagacagggttttt
ctctaaaaccctggttttcctgaaactcactttgtagaccagactggcct
cgaactcagaaatcagcctgcctctgtctctgagtgttgggattacaagc
gtgcaccaccatgcctggctactgggtaaattattaaatatattagtaat
gctgattttctagtagaacattatacatattatcatttgataagttcagt
ttcatatagaaaagcctcaattaagctttgttgtatagtaaaaaaaaaat
gtatgttatttagctaaaattatgtcttcaaattaaaataataatgagca
tgtgtcataaaatttaaggctcttttgtgtgtgtaagtcacatagagtta
aaataagacacttgtaaaccaaatatctggacgagaacagttctctagaa
tgtaaagacaccagtaagaaaaccagacaaaaactttatttaaaagtgca
tgaactgggcagtggtggtgcatgcctctaatgccagcacttggggaggc
agaggcaggcagatttctgagttagagacaagtgtggtctactatgtgaa
ttccaggagagctagggcttcatagagaaatcctgtcttgaaacaaacaa
acaaaaagagttgcatgaagacatgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83222346_83223562
seq2: B6Ng01-317G19.b_47_1228 (reverse)

seq1  AGTACATTATTGATAGAGTTTTAAAATAGTAATTAAAACTGATAAAATAT  50
      |||||  |||||||||||        |  | |||  |||||||||   ||
seq2  AGTAC--TATTGATAGAG--------TCATGATT--AACTGATAA---AT  35

seq1  TTGGAAAAATTTACCTTTCTAATGTTACTTTATAAAT-TAATTAAACCAA  99
      |||| ||    |||  |||||  |||||||||| | | |||  ||||   
seq2  TTGGGAA---GTAC--TTCTA--GTTACTTTATGAGTATAACGAAAC---  75

seq1  AAAATTAGTGGTTCTTAAATTCCTAAGTTTTATGCTATGATTT-GATAAT  148
          | |||||||||||||||||| || ||||||||| ||||| ||||||
seq2  ----TAAGTGGTTCTTAAATTCCTTAG-TTTATGCTA-GATTTGGATAAT  119

seq1  ATAATATAAAATTCTACCATTGAGCATTTATAAATCAGAAGTTCAGGTCT  198
      ||||||||||| ||||||||   |||||||||||||||||| ||||||| 
seq2  ATAATATAAAA-TCTACCATGAGGCATTTATAAATCAGAAG-TCAGGTC-  166

seq1  TGAGTCAATCTCATGTATTTTTTCCTTTGTAAAGTATTCAAAATATGTTT  248
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  TGAGTC-ATCTCATGTATTTTTTCCTTTGTAAAGTATTC-AAATATGTTT  214

seq1  GCAACTGTCTATGTTTTTCCTAGAGGTATAGTAATTCTCTCAGTTTATCC  298
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GCAACTGTCTATGTTTTTCCTAGAGGTATAGTAA-TCTCTCAGTTTATCC  263

seq1  AGTAGAAACAATCTCCCAAATGATCATAATTTATAGTGTGCATTGTAGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAACAATCTCCCAAATGATCATAATTTATAGTGTGCATTGTAGAA  313

seq1  AGTATCCTATCATGATTAAAACATTTTAAACTAAACATTCTAGTATTTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTATCATGATTAAAACATTTTAAACTAAACATTCTAGTATTTTA  363

seq1  TTTTAAAGCATATATGTATATGCATGCAAACAAAACATAGTCAGCTTTCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGCATATATGTATATGCATGCAAACAAAACATAGTCAGCTTTCA  413

seq1  TGACTCATGGTTTAGGAGCTGTCATTACAGAATTGTTCGGCCATTTGAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCATGGTTTAGGAGCTGTCATTACAGAATTGTTCGGCCATTTGAAC  463

seq1  TACACCATAAGACTTTTATACAGCTCTTCCTGGATGGAATAGCACAGAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCATAAGACTTTTATACAGCTCTTCCTGGATGGAATAGCACAGAGA  513

seq1  AACCCAATAACCAAATTGTGATTGAGGGCTCAATAAAGACAAATGTAGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATAACCAAATTGTGATTGAGGGCTCAATAAAGACAAATGTAGGC  563

seq1  AGAAAGACAATGAAAGCCTGTAAGAGTTCTGTAGGTTTGAAAACATCATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACAATGAAAGCCTGTAAGAGTTCTGTAGGTTTGAAAACATCATT  613

seq1  CTTCTTGGTTTGTTGCTCTTCATTTCCTCAGGCTCACTGTAAAGTGACTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGTTTGTTGCTCTTCATTTCCTCAGGCTCACTGTAAAGTGACTC  663

seq1  TCAGTAAACTCGGTGTGGATAAACAACATTTTTGTTTTTATGTTTGGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAACTCGGTGTGGATAAACAACATTTTTGTTTTTATGTTTGGTTT  713

seq1  TATATCTGAGATTATTCACATAATAACTTAACATGTTTGAATGCCCACTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTGAGATTATTCACATAATAACTTAACATGTTTGAATGCCCACTG  763

seq1  TACAACCAGAAGAAGCAAAGCTCCTAAGAGATTGCGAGACTATTGACACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCAGAAGAAGCAAAGCTCCTAAGAGATTGCGAGACTATTGACACA  813

seq1  GAGGCTTCAGACAAATGAACTAGATGTCTGCCAAGTATGCATCCTCCCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTCAGACAAATGAACTAGATGTCTGCCAAGTATGCATCCTCCCCA  863

seq1  GGAATTCAACCAGAAAAACTTTTGTTTGGAAATATGAACTATGGTAAAGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCAACCAGAAAAACTTTTGTTTGGAAATATGAACTATGGTAAAGC  913

seq1  TAAAATGCAACTTTAGGAATGGCAGTGCATAGATCTAGTGTTGAGAACAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGCAACTTTAGGAATGGCAGTGCATAGATCTAGTGTTGAGAACAT  963

seq1  AAAGATAATTTGTAAATGGTCTCTAAAAACAAAGAAGATGGAGAACAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAATTTGTAAATGGTCTCTAAAAACAAAGAAGATGGAGAACAATG  1013

seq1  GACACTATTACAGGAAATAAGCTATAGGTTACACAAACCAGAAACTGATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTATTACAGGAAATAAGCTATAGGTTACACAAACCAGAAACTGATA  1063

seq1  TCTCTGAATTTTTTATAACATAGCTTCAGCCTTTGAAAGCATGGAACAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAATTTTTTATAACATAGCTTCAGCCTTTGAAAGCATGGAACAAA  1113

seq1  ATGTCCATCAGTGTGCCTGGAGGACCAGAAAAGCAGCAATGCTGTGACAA  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATCAGTGTGCCTGGAGGACCAGAAAAGCAGCAATGCTGTGACAA  1163

seq1  AACCTACATATAAGAATTC  1217
      |||||||||||||||||||
seq2  AACCTACATATAAGAATTC  1182


seq1: chr16_83083992_83084966
seq2: B6Ng01-317G19.g_67_1043

seq1  GAATTCTTTTCTTTTATGATTCTATAAGATGTTCTACACCTATCATCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTTTATGATTCTATAAGATGTTCTACACCTATCATCTTA  50

seq1  TGTAAATAACTTATTTGTTAAGATACGATAAATAAAAGAATCAATATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATAACTTATTTGTTAAGATACGATAAATAAAAGAATCAATATAAA  100

seq1  AAGTTCTTTGACTGCTCGTGATAACTATAAAAATGGGATAAATTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTTGACTGCTCGTGATAACTATAAAAATGGGATAAATTTGTTTT  150

seq1  GAAGGTAATTACTGATTCATTCTATCTTACAAATAATATTTCAGAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTAATTACTGATTCATTCTATCTTACAAATAATATTTCAGAGAAAA  200

seq1  ATAACATAGTATTAGTAATTCTTTAATTTCAGTTATTTATTATTCACAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATAGTATTAGTAATTCTTTAATTTCAGTTATTTATTATTCACAAC  250

seq1  TACCGTTGCAGAAAACTCTGGGTAATTTTTTGTTGTTGTTGTTGTTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGTTGCAGAAAACTCTGGGTAATTTTTTGTTGTTGTTGTTGTTGTTT  300

seq1  GTTTGTTTGTTTGTTTGTTTTTCATTTTTCGTTTTCGAGACAGGGTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTGTTTGTTTTTCATTTTTCGTTTTCGAGACAGGGTTTTT  350

seq1  CTCTAAAACCCTGGTTTTCCTGAAACTCACTTTGTAGACCAGACTGGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAACCCTGGTTTTCCTGAAACTCACTTTGTAGACCAGACTGGCCT  400

seq1  CGAACTCAGAAATCAGCCTGCCTCTGTCTCTGAGTGTTGGGATTACAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTCAGAAATCAGCCTGCCTCTGTCTCTGAGTGTTGGGATTACAAGC  450

seq1  GTGCACCACCATGCCTGGCTACTGGGTAAATTATTAAATATATTAGTAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACCACCATGCCTGGCTACTGGGTAAATTATTAAATATATTAGTAAT  500

seq1  GCTGATTTTCTAGTAGAACATTATACATATTATCATTTGATAAGTTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTTTCTAGTAGAACATTATACATATTATCATTTGATAAGTTCAGT  550

seq1  TTCATATAGAAAAGCCTCAATTAAGCTTTGTTGTATAGTAAAAAAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATAGAAAAGCCTCAATTAAGCTTTGTTGTATAGTAAAAAAAAAAT  600

seq1  GTATGTTATTTAGCTAAAATTATGTCTTCAAATTAAAATAATAATGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTATTTAGCTAAAATTATGTCTTCAAATTAAAATAATAATGAGCA  650

seq1  TGTGTCATAAAATTTAAGGCTCTTTTGTGTGTGTAAGTCACATAGAGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATAAAATTTAAGGCTCTTTTGTGTGTGTAAGTCACATAGAGTTA  700

seq1  AAATAAGACACTTGTAAACCAAATATCTGGACGAGAACAGTTCTCTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGACACTTGTAAACCAAATATCTGGACGAGAACAGTTCTCTAGAA  750

seq1  TGTAAAGACACCAGTAAGAAAACCAGACAAAAACTTTATTTAAAAGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGACACCAGTAAGAAAACCAGACAAAAACTTTATTTAAAAGTGCA  800

seq1  TGAACTGGGCAGTGGTGGTGCATGCCTCTAATGCCAGCACTT-GGGAGGC  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGAACTGGGCAGTGGTGGTGCATGCCTCTAATGCCAGCACTTGGGGAGGC  850

seq1  AGAGGCAGGCAGATTTCTGAGTTAGAGACCAGTGTGGTCTACAATGTGAA  899
      ||||||||||||||||||||||||||||| |||||||||||| |||||||
seq2  AGAGGCAGGCAGATTTCTGAGTTAGAGACAAGTGTGGTCTACTATGTGAA  900

seq1  TTCCAGGAGAGCCAGGGCTACATAGAGAAACCCTGTCTTGAAACAAACAA  949
      |||||||||||| |||||| |||||||||| |||||||||||||||||||
seq2  TTCCAGGAGAGCTAGGGCTTCATAGAGAAATCCTGTCTTGAAACAAACAA  950

seq1  ACAAAAAGAG-TGCATGAAGACATGGA  975
      |||||||||| |||||||||||||| |
seq2  ACAAAAAGAGTTGCATGAAGACATGCA  977


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