BAC Information

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BAC

Clone NameB6Ng01-320O17
Chromosome16 (Build37)
Map Location 27,767,057 - 27,768,157
singlet/doubletsinglet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-320O17.bB6Ng01-320O17.g
ACCGA110164GA110165
length9771,104
definitionB6Ng01-320O17.b B6Ng01-320O17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttttccattttttattagg
tatttcgctcatttacatttgcaatgctataccaaaagtcccccatagcc
acccaccccctctcccctacccacccactccccttttatggccctggcgt
tcccctgtactggggcatataaagtttgcgtgtccaatgggcctctcttt
ccagtgatggccgactaggccatcttttgatgcatatgcagctagagtca
agagctccggggtactggttagttcataatgttgttccacctatagggtt
gcagatccctttagcttctttggtactttctctagctccttcattggggg
ccatgtgatccatccaatagccgactgtgagcatccacttctatgtttgc
taggcccaggcatactctgacaagagacagctatatcagggtcctttcag
cataatcttgctagtgtatgcaatggtgtcagcatttggaagctgattag
gggatggatccccggatatgctagtgtctacatggtccatccttttatct
cagctccaaactttgtctctgtaactccttccaagggtgttttgttccca
cttctaaggaggggcatagtgttcacacttcagtcttcatttttcttgag
tttcatgtgtttaggaaattgtatcttatatcttgggtatcttaggtttt
gggctaatatccacttatcagtgagtacatattgtgtgagttcctttgtg
aatgtgttacctcactcagaatgatgccctccaggtccatccatttggct
aggaatttcataaattcattctttttaatagctgagtagtactccattgt
gtagatgtaccacattttctgtatccattcctctgttgaggggcatctgg
gttccttccagcttctggctattataaataagctgctatgaacatagtgg
gagcatgtgtccttcttaccagttggg
gaattcccatggcaactgagacatgttagtaccatggagtagtcttagag
tgtaggaaagcccaagtcttccccactttttttcttccactagtttctga
ccagtgccattttctaaatcctgagcctacagttcccctttattttcctc
tgctgatgtctaggcattgacttgactacattttccaaatttacagttgc
taagcctatagctaaaggatttcgtgttttccaccctgtattttggtgtt
atttggtcaggcctttccttgttatcctgattttcatttcatttagaatg
gcattacactaaatgccacttcacagtggatataacttgattttctcacc
actaaagctgttccaagttccaaaagagactttgaaagttttaagagtgc
tgtctttctggagaccttggtgacagaagccagacttagtgtatcttgcc
ttacaaaaaggccaatgaactctggaagaagccaggaccataaggatcac
aatttgagtgtgaaacacacccatcatgtgtctgaatacttggtgtcaag
ttggtgctttggattttggaggccttgttaaagccttgtttggaggccta
tgttcaagacatgaggtcttggtggtggaaattgcaggctcagatccaaa
tttaaaattttaaaaccacccttgtttgcagcctgggcttttctttctag
tctacaaggatgtgatatttctcttgagccattaccatcccacaccttca
ctgtattgatgaactatatccatgaactgtatcttttaggtggttccaac
aaaagattatgagtacagagaatattcacacacttatctatctcaatgtg
tattgttagtcctaagtatgtttatatctatttattatttacagagaaat
tatatttcttgaaatatgtctttggaaacaatatttaccaataatacata
tttaaatagaattatgccagaaattatgaaaatatacaatttataaaaca
ttgatgcaacagcagaaaaacatttgactaaaccttaatgaaatcatttt
aaatcttcttttagtatagaaacccactacgagtattccgctcccaatgt
atga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27767057_27768157
seq2: B6Ng01-320O17.g_66_1169 (reverse)

seq1  TCATACAT--GGAGCG--ATACTCGTAGTGGGTTTCTATACTAAAAGAGA  46
      ||||||||  ||||||  ||||||||||||||||||||||||||||||  
seq2  TCATACATTGGGAGCGGAATACTCGTAGTGGGTTTCTATACTAAAAGAAG  50

seq1  TTTTAAAATGATTTTCATTAA-GTTTAGTCAAATG-TTTTCTGCTGTTTG  94
       |||||||||| ||||||||| ||||||||||||| |||||||||| |||
seq2  ATTTAAAATGA-TTTCATTAAGGTTTAGTCAAATGTTTTTCTGCTG-TTG  98

seq1  CATCAATGTTTTATAAATTGTATATTTTCATAATTTTCTGGCATAATTCT  144
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CATCAATGTTTTATAAATTGTATATTTTCATAA-TTTCTGGCATAATTCT  147

seq1  ATTTAAATATGTATTATTGGTAAATATTGTTTCCAAAGACATATTTCAAG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATATGTATTATTGGTAAATATTGTTTCCAAAGACATATTTCAAG  197

seq1  AAATATAATTTCTCTGTAAATAATAAATAGATATAAACATACTTAGGACT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAATTTCTCTGTAAATAATAAATAGATATAAACATACTTAGGACT  247

seq1  AACAATACACATTGAGATAGATAAGTGTGTGAATATTCTCTGTACTCATA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATACACATTGAGATAGATAAGTGTGTGAATATTCTCTGTACTCATA  297

seq1  ATCTTTTGTTGGAACCACCTAAAAGATACAGTTCATGGATATAGTTCATC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGTTGGAACCACCTAAAAGATACAGTTCATGGATATAGTTCATC  347

seq1  AATACAGTGAAGGTGTGGGATGGTAATGGCTCAAGAGAAATATCACATCC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGTGAAGGTGTGGGATGGTAATGGCTCAAGAGAAATATCACATCC  397

seq1  TTGTAGACTAGAAAGAAAAGCCCAGGCTGCAAACAAGGGTGGTTTTAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGACTAGAAAGAAAAGCCCAGGCTGCAAACAAGGGTGGTTTTAAAA  447

seq1  TTTTAAATTTGGATCTGAGCCTGCAATTTCCACCACCAAGACCTCATGTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTGGATCTGAGCCTGCAATTTCCACCACCAAGACCTCATGTC  497

seq1  TTGAACATAGGCCTCCAAACAAGGCTTTAACAAGGCCTCCAAAATCCAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATAGGCCTCCAAACAAGGCTTTAACAAGGCCTCCAAAATCCAAA  547

seq1  GCACCAACTTGACACCAAGTATTCAGACACATGATGGGTGTGTTTCACAC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCAACTTGACACCAAGTATTCAGACACATGATGGGTGTGTTTCACAC  597

seq1  TCAAATTGTGATCCTTATGGTCCTGGCTTCTTCCAGAGTTCATTGGCCTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTGTGATCCTTATGGTCCTGGCTTCTTCCAGAGTTCATTGGCCTT  647

seq1  TTTGTAAGGCAAGATACACTAAGTCTGGCTTCTGTCACCAAGGTCTCCAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAGGCAAGATACACTAAGTCTGGCTTCTGTCACCAAGGTCTCCAG  697

seq1  AAAGACAGCACTCTTAAAACTTTCAAAGTCTCTTTTGGAACTTGGAACAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGCACTCTTAAAACTTTCAAAGTCTCTTTTGGAACTTGGAACAG  747

seq1  CTTTAGTGGTGAGAAAATCAAGTTATATCCACTGTGAAGTGGCATTTAGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGTGGTGAGAAAATCAAGTTATATCCACTGTGAAGTGGCATTTAGT  797

seq1  GTAATGCCATTCTAAATGAAATGAAAATCAGGATAACAAGGAAAGGCCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGCCATTCTAAATGAAATGAAAATCAGGATAACAAGGAAAGGCCTG  847

seq1  ACCAAATAACACCAAAATACAGGGTGGAAAACACGAAATCCTTTAGCTAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATAACACCAAAATACAGGGTGGAAAACACGAAATCCTTTAGCTAT  897

seq1  AGGCTTAGCAACTGTAAATTTGGAAAATGTAGTCAAGTCAATGCCTAGAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAGCAACTGTAAATTTGGAAAATGTAGTCAAGTCAATGCCTAGAC  947

seq1  ATCAGCAGAGGAAAATAAAGGGGAACTGTAGGCTCAGGATTTAGAAAATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGAGGAAAATAAAGGGGAACTGTAGGCTCAGGATTTAGAAAATG  997

seq1  GCACTGGTCAGAAACTAGTGGAAGAAAAAAAGTGGGGAAGACTTGGGCTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGTCAGAAACTAGTGGAAGAAAAAAAGTGGGGAAGACTTGGGCTT  1047

seq1  TCCTACACTCTAAGACTACTCCATGGTACTAACATGTCTCAGTTGCCATG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACACTCTAAGACTACTCCATGGTACTAACATGTCTCAGTTGCCATG  1097

seq1  GGAATTC  1101
      |||||||
seq2  GGAATTC  1104