BAC Information

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BAC

Clone NameB6Ng01-321A04
Chromosome16 (Build37)
Map Location 4,276,773 - 4,393,351
singlet/doubletdoublet
Overlap geneAdcy9, EG620313
Upstream geneLOC100042251, LOC100042925, LOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1, Crebbp, EG436332
Downstream geneSrl, Tcfap4, Glis2, Magmas, Coro7, Vasn, Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik, 1500031H01Rik, Mgrn1, Nudt16l1, Anks3, 4930451G09Rik, Sept12, EG432995, Rogdi, 3930401K13Rik, Ubn1, Ppl, Sec14l5, Nagpa, AU021092, Alg1, 5730409G15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-321A04.bB6Ng01-321A04.g
ACCGA110234GA110235
length2281,115
definitionB6Ng01-321A04.b B6Ng01-321A04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,276,773 - 4,277,000)(4,392,222 - 4,393,351)
sequence
aaatgcagcaaccaactgtgtcccatagtagttgtactaagtatacatgg
acagagatttgcctatgagttggtgttgtgttaattaagaaggcatttca
agccggggagtggtggctcacgcctttaatcccagcactaggggaacaaa
ggcagcggattcctgagttcaaggccagcctggtctacagagtgagttcg
gggacagccatgactatacagagaaacc
gaattcccaggatggcctcgaactcaaagagacctgcctctctctgtctc
ctgagtgctagaatcctggaattaaagtcgtataccactatgcctggcta
attctgttttttattttgtttgaatcttatcttcatctaacatttatgtt
ggtatggggcatgggtgatcttactgtctaggcagatacttggtgccact
tatatatgtatagttgatatataccacttatgaatttatagaattctgct
tatatacatctttccctgtaggtctttattgtttgtttctatgcatctgt
tcttccagataagccttagtgttcttgtttcatcataaataaacaattgc
atttttattcaagttctgacatagattaacttgatagtgtgagtttagag
cagtggttctaagctgtaggtcctgaccttcccaggggtcgaatgactga
ccctttcacaggggttgcatagcagatatttacattacagttcatatcca
tggcaaaattgtagctatgaagtaacaatgaaaatggttttatggctggg
ggtccccacaacatgaggaactacagtaaagggtcacagtgttcggaagg
ttggggccgctggcttagagcctctcacccagtgtctgtctgtttaaaga
gcttttgcatacagtgtatattgttttttgtttgttttgagacagggttt
ttctgtgttgccttggctgtcctagaactcattctatagacaacactggc
cttgaactcagagagacctgcctgcctctacttctcgagacagggttttt
ctgtgttgccttggctgtcctagaactcattctatagaccactctggcct
tgaactcacagagaccacctgcctctacttctcgagacagggtttttctg
tgttgccttggctgtcctagaacccattctatagaccactctggccttga
actcgcagagaccgcctgcctctacttctcgagtgctgggacatgatgac
tgtttactttacgtacctctaaattatctagtttactattttcattcact
acaaataggctctttctcagcagcttcctaacatggttagaattaggaag
ctttgcgattctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_4276773_4277000
seq2: B6Ng01-321A04.b_48_275

seq1  AAATGCAGCAACCAACTGTGTCCCATAGTAGTTGTACTAAGTATACATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAGCAACCAACTGTGTCCCATAGTAGTTGTACTAAGTATACATGG  50

seq1  ACAGAGATTTGCCTATGAGTTGGTGTTGTGTTAATTAAGAAGGCATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATTTGCCTATGAGTTGGTGTTGTGTTAATTAAGAAGGCATTTCA  100

seq1  AGCCGGGGAGTGGTGGCTCACGCCTTTAATCCCAGCACTAGGGGAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGGAGTGGTGGCTCACGCCTTTAATCCCAGCACTAGGGGAACAAA  150

seq1  GGCAGCGGATTCCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGCAGCGGATTCCTGAGTTCAAGGCCAGCCTGGTCTACAGAGTGAGTTCG  200

seq1  AGGACAGCCATGACTATACAGAGAAACC  228
       |||||||||||||||||||||||||||
seq2  GGGACAGCCATGACTATACAGAGAAACC  228

seq1: chr16_4392222_4393351
seq2: B6Ng01-321A04.g_64_1178 (reverse)

seq1  GAGAGAAACCGGCAAGCTTCCTAAATTCTAACCATGTTAGGAAGCCTTGC  50
      ||||| || ||  ||||||||| ||||||||||||||||||||||  |||
seq2  GAGAG-AATCGCAAAGCTTCCT-AATTCTAACCATGTTAGGAAGC--TGC  46

seq1  TGAGAAAGAGCCCTATTTGTAGTTGGAATGAAAAATAGTAAAACTTAAGG  100
      |||||||||| ||||||||||||  ||||| |||||||| |||||    |
seq2  TGAGAAAGAG-CCTATTTGTAGT--GAATG-AAAATAGT-AAACT---AG  88

seq1  ATAAATTTAAGAGGTACGTAAAAGTAAACAGTCATCATGTCCCAGCACTC  150
      ||||  || |||||||||| ||||||||||||||||||||||||||||||
seq2  ATAA--TTTAGAGGTACGT-AAAGTAAACAGTCATCATGTCCCAGCACTC  135

seq1  GAGAAGTAGAGGCAGGCGGTCTCTGCGAGTTCAAGGCCAGAGTGGTCTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAGAGGCAGGCGGTCTCTGCGAGTTCAAGGCCAGAGTGGTCTAT  185

seq1  AGAATGGGTTCTAGGACAGCCAAGGCAACACAGAAAAACCCTGTCTCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGTTCTAGGACAGCCAAGGCAACACAGAAAAACCCTGTCTCGAG  235

seq1  AAGTAGAGGCAGGTGGTCTCTGTGAGTTCAAGGCCAGAGTGGTCTATAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGGCAGGTGGTCTCTGTGAGTTCAAGGCCAGAGTGGTCTATAGA  285

seq1  ATGAGTTCTAGGACAGCCAAGGCAACACAGAAAAACCCTGTCTCGAGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTCTAGGACAGCCAAGGCAACACAGAAAAACCCTGTCTCGAGAAG  335

seq1  TAGAGGCAGGCAGGTCTCTCTGAGTTCAAGGCCAGTGTTGTCTATAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGCAGGCAGGTCTCTCTGAGTTCAAGGCCAGTGTTGTCTATAGAAT  385

seq1  GAGTTCTAGGACAGCCAAGGCAACACAGAAAAACCCTGTCTCAAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTAGGACAGCCAAGGCAACACAGAAAAACCCTGTCTCAAAACAAA  435

seq1  CAAAAAACAATATACACTGTATGCAAAAGCTCTTTAAACAGACAGACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAATATACACTGTATGCAAAAGCTCTTTAAACAGACAGACACT  485

seq1  GGGTGAGAGGCTCTAAGCCAGCGGCCCCAACCTTCCGAACACTGTGACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGAGAGGCTCTAAGCCAGCGGCCCCAACCTTCCGAACACTGTGACCC  535

seq1  TTTACTGTAGTTCCTCATGTTGTGGGGACCCCCAGCCATAAAACCATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTAGTTCCTCATGTTGTGGGGACCCCCAGCCATAAAACCATTTT  585

seq1  CATTGTTACTTCATAGCTACAATTTTGCCATGGATATGAACTGTAATGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTACTTCATAGCTACAATTTTGCCATGGATATGAACTGTAATGTA  635

seq1  AATATCTGCTATGCAACCCCTGTGAAAGGGTCAGTCATTCGACCCCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTGCTATGCAACCCCTGTGAAAGGGTCAGTCATTCGACCCCTGGG  685

seq1  AAGGTCAGGACCTACAGCTTAGAACCACTGCTCTAAACTCACACTATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAGGACCTACAGCTTAGAACCACTGCTCTAAACTCACACTATCAA  735

seq1  GTTAATCTATGTCAGAACTTGAATAAAAATGCAATTGTTTATTTATGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCTATGTCAGAACTTGAATAAAAATGCAATTGTTTATTTATGATG  785

seq1  AAACAAGAACACTAAGGCTTATCTGGAAGAACAGATGCATAGAAACAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAACACTAAGGCTTATCTGGAAGAACAGATGCATAGAAACAAAC  835

seq1  AATAAAGACCTACAGGGAAAGATGTATATAAGCAGAATTCTATAAATTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGACCTACAGGGAAAGATGTATATAAGCAGAATTCTATAAATTCA  885

seq1  TAAGTGGTATATATCAACTATACATATATAAGTGGCACCAAGTATCTGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGTATATATCAACTATACATATATAAGTGGCACCAAGTATCTGCC  935

seq1  TAGACAGTAAGATCACCCATGCCCCATACCAACATAAATGTTAGATGAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGTAAGATCACCCATGCCCCATACCAACATAAATGTTAGATGAAG  985

seq1  ATAAGATTCAAACAAAATAAAAAACAGAATTAGCCAGGCATAGTGGTATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATTCAAACAAAATAAAAAACAGAATTAGCCAGGCATAGTGGTATA  1035

seq1  CGACTTTAATTCCAGGATTCTAGCACTCAGGAGACAGAGAGAGGCAGGTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTTAATTCCAGGATTCTAGCACTCAGGAGACAGAGAGAGGCAGGTC  1085

seq1  TCTTTGAGTTCGAGGCCATCCTGGGAATTC  1130
      ||||||||||||||||||||||||||||||
seq2  TCTTTGAGTTCGAGGCCATCCTGGGAATTC  1115