BAC Information

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BAC

Clone NameB6Ng01-323L06
Chromosome16 (Build37)
Map Location 80,597,483 - 80,598,647
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik
Downstream geneLOC621365, LOC100039724, Ncam2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323L06.bB6Ng01-323L06.g
ACCGA112215GA112216
length7521,147
definitionB6Ng01-323L06.b B6Ng01-323L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctccaccaacagactgtcacatatcattcaaacctcagtgtag
gctccatttctagcactaggcactatgaccaacacaaaacaatggatgtt
ttgtaaaccttttgttttatatagcttcgtgtgtcttcgacttttggtgg
tatatttcagctcctcattttggtggggttactctgtgcttctagttctc
tctctctctctctctctctctctctctctctctctctctctctccctccc
tccctccctgtctctcactcgataacccttcttacaaaaaaaaaaatcac
tctctctctctctctatatatatacacactgtttgtatgacaactaagtg
tgtagagcgcgacttctcacatacatatctcatgtgtggttggtcagaca
cacccgcacatagagagatacaccgggggatagattatatttaggatgga
atatgtgtccctcacacactcaagatatttttttttatgctcgcgcgcgt
gcgtgcgtgtgagagagagctcgagatatatatttctctctctatatatc
cccagagagagtgtgtatgacactcgtaggcacacacttctgtgatgagc
gctagaaactcacatattggctcttctcagaaacatatatgttgcgctac
aagacagtttatgtgagactccctcctctcacagagagtatatatatcag
atacgcgttcactattattgactgagactttttcttctctgtggggtcga
ca
gaattccacagtatttacaagtaagagatgtattgattggctgcagacag
tgttaaacagtacactatcctttctcaggattcagaccaactatccctga
tgtcatattctctgggacacagtcttcttcctgctacacccaagtgttgg
aaagcccaacattgcaactgcaaatttaaataatccttatttcctgggtc
tttggcagaaagaatagaacaaactaaatcatgtgatatggaccttcgta
tcttgagaagtaagaaattaatagaatattttgttggtttgtttctaggg
aaaagtgaagagtctacttctcctttctgaaccccacccttatagtgtta
tacatgacaaccatcttctactctctcatatcaagctacgcacatagcta
cctaatgatgctttcttccaggttgaaggaaaacactcttctttgggaaa
tcactctgtcgtttctgtatgatgctctccctctcctaactgttctgcta
catcaagacttaattatgccctaatcctctgatgggtcccaagatctact
cagaaatctcattctgagaagtaatttcatattatctttcccaaaccaat
gcactaatctattctgtgtttctttcataacaataattataaaaatgatt
gtgagtaataattaatgtaccttctggcatgcagacaatacatccagagt
gagaatctggagaacagtgtatacacccttggtgaagttgaaagatttga
aacaaaatctaggagctattttagaaatgagtggggtgtgcacaagcttt
agagctgcatatgaaaaataatgcaggatgccacttttcatcagtgagga
gaaaaaagactgtaacagagcaccgcactcagtagcctcgcttttgctac
atccattcaggtcaactcagttgtgtgggtttggtaccataaaattttga
atacttgctattttatgagcagactggagattttttctagaggtagttta
ctatacatttatgcatgagcatgagaaggagaattctcagacagtagaac
acactcaagagtatggtgttatacgtttctcaagatagaatggagcttaa
ggattcaaatagtcggtatgaattttggtttgaagctctggaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80597483_80598647
seq2: B6Ng01-323L06.g_66_1212

seq1  GAATTCCACAGTATTTACAAGTAAGAGATGTATTGATTGGCTGCAGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGTATTTACAAGTAAGAGATGTATTGATTGGCTGCAGACAG  50

seq1  TGTTAAACAGTACACTATCCTTTCTCAGGATTCAGACCAACTATCCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAACAGTACACTATCCTTTCTCAGGATTCAGACCAACTATCCCTGA  100

seq1  TGTCATATTCTCTGGGACACAGTCTTCTTCCTGCTACACCCAAGTGTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATATTCTCTGGGACACAGTCTTCTTCCTGCTACACCCAAGTGTTGG  150

seq1  AAAGCCCAACATTGCAACTGCAAATTTAAATAATCCTTATTTCCTGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAACATTGCAACTGCAAATTTAAATAATCCTTATTTCCTGGGTC  200

seq1  TTTGGCAGAAAGAATAGAACAAACTAAATCATGTGATATGGACCTTCGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGAAAGAATAGAACAAACTAAATCATGTGATATGGACCTTCGTA  250

seq1  TCTTGAGAAGTAAGAAATTAATAGAATATTTTGTTGGTTTGTTTCTAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGAAGTAAGAAATTAATAGAATATTTTGTTGGTTTGTTTCTAGGG  300

seq1  AAAAGTGAAGAGTCTACTTCTCCTTTCTGAACCCCACCCTTATAGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAAGAGTCTACTTCTCCTTTCTGAACCCCACCCTTATAGTGTTA  350

seq1  TACATGACAACCATCTTCTACTCTCTCATATCAAGCTACGCACATAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGACAACCATCTTCTACTCTCTCATATCAAGCTACGCACATAGCTA  400

seq1  CCTAATGATGCTTTCTTCCAGGTTGAAGGAAAACACTCTTCTTTGGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATGATGCTTTCTTCCAGGTTGAAGGAAAACACTCTTCTTTGGGAAA  450

seq1  TCACTCTGTCGTTTCTGTATGATGCTCTCCCTCTCCTAACTGTTCTGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGTCGTTTCTGTATGATGCTCTCCCTCTCCTAACTGTTCTGCTA  500

seq1  CATCAAGACTTAATTATGCCCTAATCCTCTGATGGGTCCCAAGATCTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGACTTAATTATGCCCTAATCCTCTGATGGGTCCCAAGATCTACT  550

seq1  CAGAAATCTCATTCTGAGAAGTAATTTCATATTATCTTTCCCAAACCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCTCATTCTGAGAAGTAATTTCATATTATCTTTCCCAAACCAAT  600

seq1  GCACTAATCTATTCTGTGTTTCTTTCATAACAATAATTATAAAAATGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAATCTATTCTGTGTTTCTTTCATAACAATAATTATAAAAATGATT  650

seq1  GTGAGTAATAATTAATGTACCTTCTGGCATGCAGACAATACATCCAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTAATAATTAATGTACCTTCTGGCATGCAGACAATACATCCAGAGT  700

seq1  GAGAATCTGGAGAACAGTGTATACACCCTTGGTGAAGTTGAAAGATTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTGGAGAACAGTGTATACACCCTTGGTGAAGTTGAAAGATTTGA  750

seq1  AACAAAATCTAGGAGCTATTTTAGAAATGAGTGGGGTGTGCACAAGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATCTAGGAGCTATTTTAGAAATGAGTGGGGTGTGCACAAGCTTT  800

seq1  AGAGCTGCATATGAAAAATAATGCAGGATGCCACTTTTCATCAGTGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGCATATGAAAAATAATGCAGGATGCCACTTTTCATCAGTGAGGA  850

seq1  GAAAAAAGACTGTAACAGAGCACCGCACTCAGTAGCCTCGCTTTTGCTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGACTGTAACAGAGCACCGCACTCAGTAGCCTCGCTTTTGCTAC  900

seq1  ATCCATTCAGGTCAACTCAGGTTGTGTGGGTTTGGTACCATAAAAATTTG  950
      ||||||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  ATCCATTCAGGTCAACTCA-GTTGTGTGGGTTTGGTACCATAAAATTTTG  949

seq1  AATACTTGCTATTTTATGAAGCAGAACTGGAGA-TTTTTCTAGAGGTAGT  999
      |||||||||||||||||| ||||| |||||||| ||||||||||||||||
seq2  AATACTTGCTATTTTATG-AGCAG-ACTGGAGATTTTTTCTAGAGGTAGT  997

seq1  TTACTATACATTTATGCATGAAGGCAATGAGAAGGAGAAATTCTCAGAAC  1049
      |||||||||||||||||||||  || ||||||||||| ||||||||| ||
seq2  TTACTATACATTTATGCATGA--GC-ATGAGAAGGAG-AATTCTCAG-AC  1042

seq1  AAGGTAAGACACACTCAAGAGTAT-GTG-TATACGTTTCTCAAAAGATAA  1097
      |  |||  |||||||||||||||| ||| ||||||||||||  |||||| 
seq2  A--GTAGAACACACTCAAGAGTATGGTGTTATACGTTTCTC--AAGATAG  1088

seq1  GATGGAGCTAAAGATTTTTAAAAATAGTC-GTATGGAATATTTGTGGGTT  1146
       |||||||| |||  ||    |||||||| |||| |||| ||    ||||
seq2  AATGGAGCTTAAGGATT---CAAATAGTCGGTAT-GAATTTT----GGTT  1130

seq1  TGAAGCTCTGAGAAACACA  1165
      |||||||||  | ||||||
seq2  TGAAGCTCT--GGAACACA  1147