BAC Information

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BAC

Clone NameB6Ng01-324J07
Chromosome16 (Build37)
Map Location 86,748,496 - 86,801,155
singlet/doubletdoublet
Overlap genenone
Upstream geneAdamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-324J07.bB6Ng01-324J07.g
ACCGA112857GA112858
length1,1871,120
definitionB6Ng01-324J07.b B6Ng01-324J07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,799,958 - 86,801,155)(86,748,496 - 86,749,191)
sequence
gaattctactaatttttccaagattttctcacccctaagttcattctatc
ccaaattttaaggttcactaagcacaaaactaaagtgtgtcagttttgga
agaacatgtgaagattgtccatcatttttcacatttttctttgacaagag
agagtgaggagagtctccagggcccaattctgagacatttggccacagtt
tcattcctgaagtgagtgagagaacaaaaagttcaaatacgtacatgaca
tagtcctagtttttggtgttggcaagtttgcagaaatgttttcagcaact
gttgtattattctgtttttattttttctaatgcagctggtaacaaaagta
tggttactttttctccattttaatattgtaagcataaaaaggcgttttgt
gcagagacactgcagtagtagcatgcaaaaaatataaatatcattctggt
ctgagagctgtgaatcaatttttttatttgtttacaccttcatatctgaa
gtcagaactaaagaaagaactgatgtaagagctaaaaatacattttagca
cccatcacttgtgccagtgtgttcatgcatccataagcatgctcacacgc
aacagcatgccctatggattgttaatcagttttacctttcaagtgtgagt
aaaagagagaggaaactagcaactagaacataacatgcattaggagcagt
tctcaaagaacagagtgctgttatacatcaaattttctttttattcggac
atattaagtaacatcttaccttcccagtctttccttagtacacatttact
gcactgcctagagaattttgaaaattcagaagacatttgatcctcttaat
aataattaataattattagtaattcaataataattacttttcagcttggt
tatgtaagagctgaactgtcctagaatctttatagaataaattattatat
ttatcttgtaaaagattagaaaatctaggaacaagcacttcctgaagaaa
atatcttattgtataatttctcaggaaaatgttttatatatcaattaaag
tatcgttgcataacaccacaccattgaattagaatagcagagtattactc
tttatgtacaattttatttataatatcctttaattcttacgtacttaact
tcgagccccgaatttatattagggtgaatattttgag
gaattctttctctctctctcaccaatgttccacctcttatttcctgccta
aaccactggccatagacttttaaaatgaagcatccatacactttgcaaga
tattttctcttcaattatatggcagggggacattattttctggacgaatc
tatttggtgttctataagcttcttgcatctttatatgcatgtctatctta
aggtaaaaaacatttcatctatgattttgttgataatattttctgagcct
ttgattttcaatttttctcattttctcttcctctcaatcttaggcttggt
cttttcatagtgctccatattttttggcatgttttgtccccaaaaatttt
agatgtaacattttctttgaccaagttattagtttcttctattgtaactt
ctttacctgagattatttcttccacctcttgtatttgtaggcaatgcttg
cttttgtagttcctgttcacttacctatattttccatctagaatatatcc
tcagattgtgtctcctttatcacttctatatttagtctcaggtcttaaac
agttctattcatatctttaacctatttttttcttagatttctataaagaa
tttatttactcatatcctctcaatgattggttgtgttttcttgaattttt
tcaaggggtttattcatgtcttctttaaggacctctataatcttcatgaa
attgattttgaagtagttttcttgtgtttcagttatgttggaatatgcag
agtgtgctgtagtaggatacctgagctgttagggtgacatatttccctga
cttctgttaaatgtgttgttacaggggcctttaggcatctggatttggag
tagttatagcttaagtacaaatttttgaggttgtctttgttggatgtttt
tacctcttgatttgtatatcttctttggtcttctggcttgtgtggcttgg
agttctggtgaccagagtgctctgagtcctttgatccagtagtcctctcc
atggggtttgacagtctcagacctttggagtcttagagtctgagactgag
tgctatctggtaggccagcttctctgattcatgacttggatagtacatcg
gattcatttgggaaagctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86799958_86801155
seq2: B6Ng01-324J07.b_46_1232 (reverse)

seq1  CTCAAAATATTCA-CCTAATATAAATTTGGGGTTTTATAATGTTAAGTAC  49
      ||||||||||||| ||||||||||||| |||| |     | |||||||||
seq2  CTCAAAATATTCACCCTAATATAAATTCGGGGCT---CGAAGTTAAGTAC  47

seq1  TGTAAGAATAAAAGGATATTATTAAATAAAATTGTACATAAAAGAAGTTA  99
       |||||||| ||||||||||| ||||||||||||||||| |||||   ||
seq2  -GTAAGAATTAAAGGATATTA-TAAATAAAATTGTACAT-AAAGA--GTA  92

seq1  ATACTCTGCTATTCTAAATTTCAATGGTTGTGTGTTATGCAACGATACTT  149
      |||||||||||||||||  |||||||||   |||||||||||||||||||
seq2  ATACTCTGCTATTCTAA--TTCAATGGTGTGGTGTTATGCAACGATACTT  140

seq1  TAATTGATTATATAAAACATTTTCCTGAGAAATTATTACAATAAGATATT  199
      ||||||| ||||||||||||||||||||||||||| ||||||||||||||
seq2  TAATTGA-TATATAAAACATTTTCCTGAGAAATTA-TACAATAAGATATT  188

seq1  TTCTTCA-GAAGTGCTTGTTCCTAGATTTTCTAATCTTTTACAAGATAAA  248
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGGAAGTGCTTGTTCCTAGATTTTCTAATCTTTTACAAGATAAA  238

seq1  TATAATAATTTATTCTATAAAGATTCTAGGACAGTTCAGCTCTTACATAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAATTTATTCTATAAAGATTCTAGGACAGTTCAGCTCTTACATAA  288

seq1  CCAAGCCTGAAAAGTAATTATTATTGAATTACTAATAATTATTAATTATT  348
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAG-CTGAAAAGTAATTATTATTGAATTACTAATAATTATTAATTATT  337

seq1  ATTAAGAGGATCAAATGTCTTCTGAATTTTCAAAATTCTCTAGGCAGTGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAGGATCAAATGTCTTCTGAATTTTCAAAATTCTCTAGGCAGTGC  387

seq1  AGTAAATGTGTACTAAGGAAAGACTGGGAAGGTAAGATGTTACTTAATAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATGTGTACTAAGGAAAGACTGGGAAGGTAAGATGTTACTTAATAT  437

seq1  GTCCGAATAAAAAGAAAATTTGATGTATAACAGCACTCTGTTCTTTGAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGAATAAAAAGAAAATTTGATGTATAACAGCACTCTGTTCTTTGAGA  487

seq1  ACTGCTCCTAATGCATGTTATGTTCTAGTTGCTAGTTTCCTCTCTCTTTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCCTAATGCATGTTATGTTCTAGTTGCTAGTTTCCTCTCTCTTTT  537

seq1  ACTCACACTTGAAAGGTAAAACTGATTAACAATCCATAGGGCATGCTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACTTGAAAGGTAAAACTGATTAACAATCCATAGGGCATGCTGTT  587

seq1  GCGTGTGAGCATGCTTATGGATGCATGAACACACTGGCACAAGTGATGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTGAGCATGCTTATGGATGCATGAACACACTGGCACAAGTGATGGG  637

seq1  TGCTAAAATGTATTTTTAGCTCTTACATCAGTTCTTTCTTTAGTTCTGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAATGTATTTTTAGCTCTTACATCAGTTCTTTCTTTAGTTCTGAC  687

seq1  TTCAGATATGAAGGTGTAAACAAATAAAAAAATTGATTCACAGCTCTCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATATGAAGGTGTAAACAAATAAAAAAATTGATTCACAGCTCTCAG  737

seq1  ACCAGAATGATATTTATATTTTTTGCATGCTACTACTGCAGTGTCTCTGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATGATATTTATATTTTTTGCATGCTACTACTGCAGTGTCTCTGC  787

seq1  ACAAAACGCCTTTTTATGCTTACAATATTAAAATGGAGAAAAAGTAACCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACGCCTTTTTATGCTTACAATATTAAAATGGAGAAAAAGTAACCA  837

seq1  TACTTTTGTTACCAGCTGCATTAGAAAAAATAAAAACAGAATAATACAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGTTACCAGCTGCATTAGAAAAAATAAAAACAGAATAATACAAC  887

seq1  AGTTGCTGAAAACATTTCTGCAAACTTGCCAACACCAAAAACTAGGACTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTGAAAACATTTCTGCAAACTTGCCAACACCAAAAACTAGGACTA  937

seq1  TGTCATGTACGTATTTGAACTTTTTGTTCTCTCACTCACTTCAGGAATGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGTACGTATTTGAACTTTTTGTTCTCTCACTCACTTCAGGAATGA  987

seq1  AACTGTGGCCAAATGTCTCAGAATTGGGCCCTGGAGACTCTCCTCACTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGCCAAATGTCTCAGAATTGGGCCCTGGAGACTCTCCTCACTCT  1037

seq1  CTCTTGTCAAAGAAAAATGTGAAAAATGATGGACAATCTTCACATGTTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGTCAAAGAAAAATGTGAAAAATGATGGACAATCTTCACATGTTCT  1087

seq1  TCCAAAACTGACACACTTTAGTTTTGTGCTTAGTGAACCTTAAAATTTGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACTGACACACTTTAGTTTTGTGCTTAGTGAACCTTAAAATTTGG  1137

seq1  GATAGAATGAACTTAGGGGTGAGAAAATCTTGGAAAAATTAGTAGAATTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAATGAACTTAGGGGTGAGAAAATCTTGGAAAAATTAGTAGAATTC  1187

seq1: chr16_86748496_86749191
seq2: B6Ng01-324J07.g_511_1185

seq1  GCTTGCTTTTGTAGTTCCTGTTCACTTACCTATATTTTCCATCTAGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTTTGTAGTTCCTGTTCACTTACCTATATTTTCCATCTAGAATA  50

seq1  TATCCTCAGATTGTGTCTCCTTTATCACTTCTATATTTAGTCTCAGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCAGATTGTGTCTCCTTTATCACTTCTATATTTAGTCTCAGGTCT  100

seq1  TAAACAGTTCTATTCATATCTTTAACCTATTTTTTTCTTAGATTTCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGTTCTATTCATATCTTTAACCTATTTTTTTCTTAGATTTCTATA  150

seq1  AAGAATTTATTTACTCATATCCTCTCAATGATTGGTTGTGTTTTCTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTATTTACTCATATCCTCTCAATGATTGGTTGTGTTTTCTTGAA  200

seq1  TTTTTTCAAGGGGTTTATTCATGTCTTCTTTAAGGACCTCTATAATCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAGGGGTTTATTCATGTCTTCTTTAAGGACCTCTATAATCTTC  250

seq1  ATGAAATTGATTTTGAAGTAGTTTTCTTGTGTTTCAGTTATGTTGGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTGATTTTGAAGTAGTTTTCTTGTGTTTCAGTTATGTTGGAATA  300

seq1  TGCAGAGTGTGCTGTAGTAGGATACCTGAGCTGTTAGGGTGACATATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGTGTGCTGTAGTAGGATACCTGAGCTGTTAGGGTGACATATTTC  350

seq1  CCTGACTTCTGTTAAATGTGTTGTTACAGGGGCCTTTAGGCATCTGGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTTCTGTTAAATGTGTTGTTACAGGGGCCTTTAGGCATCTGGATT  400

seq1  TGGAGTAGTTATAGCTTAAGTACAAATTTTTGAGGTTGTCTTTGTTGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTAGTTATAGCTTAAGTACAAATTTTTGAGGTTGTCTTTGTTGGAT  450

seq1  GTTTTTACCTCTTGATTTGTATATCTTCTTTGGTCTTCTGGCTTGTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTACCTCTTGATTTGTATATCTTCTTTGGTCTTCTGGCTTGTGTGG  500

seq1  CTTGGAGTTCTGGTGACCAGAGTGCTCTGAAGTCCTTTGATCCAGTAGTC  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTTGGAGTTCTGGTGACCAGAGTGCTCTG-AGTCCTTTGATCCAGTAGTC  549

seq1  CTCCTCCATTGGGGTTTTGACAGTCTTCAAGACCTTTGGAGTTCTAGAGT  600
      || ||||||  ||| |||||||||||   |||||||||||||  ||||| 
seq2  CT-CTCCAT--GGGGTTTGACAGTCT--CAGACCTTTGGAGTCTTAGAG-  593

seq1  TCTGAGAACTGAGGTGCTATCTGGTAGGGCAGGGTTTCCTCCTGAATCAT  650
      |||||| ||||| ||||||||||||||| |||  | |    |||| ||||
seq2  TCTGAG-ACTGA-GTGCTATCTGGTAGGCCAGCTTCT----CTGATTCAT  637

seq1  GGCCTTGATATAGTAACAATTAGGGGTTCTATTGGGGGAAAGCTGA  696
      | | | |  ||||| |||     || |||  ||  |||||||||||
seq2  GACTTGG--ATAGT-ACA---TCGGATTCATTT--GGGAAAGCTGA  675