BAC Information

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BAC

Clone NameB6Ng01-331P03
Chromosome16 (Build37)
Map Location 80,711,730 - 80,712,875
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik, LOC621365
Downstream geneLOC100039724, Ncam2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-331P03.bB6Ng01-331P03.g
ACCGA118184GA118185
length1,1941,142
definitionB6Ng01-331P03.b B6Ng01-331P03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcaattctgagccccatttttaatggggttatttgattt
tctggagtccaccctcttcagttctttatatatattggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtcct
tttgtcttattgacagtatcttttgccttgcagaagctttgcagtttcat
gaggcctcatttgttgattctcgatcttacagcacaagccattgctcttc
tattcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataggagtggttcgatttgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcaaagattaagtg
gccataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtcagtataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcagggatggtgattccaccagaggttctttt
atccttgagaagagtttttgctatcctaggtcttttgttattccagatga
atttgcagattgctctttttaattcgttgaagaattgagatggaattttg
aatctgtagattgcttttggcaagatagccatttttacaatgttgatcct
gccaatccatgagcatgggagatctttccatcttctgagatcttctttaa
tttttttttcagagacttgaagtttttatcatacagatcttttcacttac
ttagttagagtcacgccaagatattttatattatttgtgactatgagaag
ggtgttgtttccctaaattcttttctcagcctgtttattcttgtgtggcc
aaatgcatgaactctaggagatgagacaagtgtggacactggtgcccttc
tagattggaacaaaccccatggatgagttacagaagataaagatggggag
cctggaacaagatgggacccttctaaggaactgctaatctagaatccacc
ttcatagtcagcttccaaaacgctgtaccatccaccgttggata

gaattctaggagccctgtgaggtggatctgccattttaactgtaataata
tattcaaaagtcatttggctgatgtgagattttattactttacttagaag
taataatctctattgctaatacccttacctttctttaatttcaatttttc
tttctgactacgtgtatttgagcactttaaaatcaatactagcaatattg
gacagtgaaagtggaaacaaaatatattcaaatgggaggagaggcccttg
gtcctgtgaagactcgatgccccagtgtaggctaatgcaggaaccgagaa
gcagacgtgggtgggttggtaccagagcagggggagaaggattggttagg
agacttttcagaggggaaacaaggaaaggggataaaatttgaaatatata
ataaaaaaaattcaaaatgtaattaaatagcagttcatatctattcttta
ttaaacttttgccatgatgcattgatcgagttctgaattagaccaaactt
gcttttttgtttgtccttcacctgcctcagatctctcggttaattctgag
ctctaatcttcctggctgcattattgaatctgctactttgattttgagtc
attatccactcccctttgccaagctctggtttataatatcgtgcccttca
tggttagatcagtttaaggatccaagtgaaacatgtagagtgttcaattt
gaatacataaaacaatagagcagtagttaaaactgcatgtaccatataaa
aactatgagccttaaagcatcactccattaggaaaggccaattaaagaac
gtggctcttttgctcttccctgacggtcattagagcaaaagtttgacagc
taaaatttttgaatgaatttcttatattgcctacttctgaaaggactctt
attcttttcattccatcacaaagttttagacaggatgttaaatatgaact
aaatatttatattactataaaacttaatatgaataaaatgctatacacaa
cattaagcttttcctagaatgtatctataaaatccctagctctgctatat
gacctgccacgtacctacactttttttcacgtttcaggaaaatccactat
gggattttgtaggtctatggcatcgcttgcctaggccttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80711730_80712875
seq2: B6Ng01-331P03.g_71_1212

seq1  GAATTCTAGGAGCCCTGTGAGGTGGATCTGCCATTTTAACTGTAATAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAGCCCTGTGAGGTGGATCTGCCATTTTAACTGTAATAATA  50

seq1  TATTCAAAAGTCATTTGGCTGATGTGAGATTTTATTACTTTACTTAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAAAGTCATTTGGCTGATGTGAGATTTTATTACTTTACTTAGAAG  100

seq1  TAATAATCTCTATTGCTAATACCCTTACCTTTCTTTAATTTCAATTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATCTCTATTGCTAATACCCTTACCTTTCTTTAATTTCAATTTTTC  150

seq1  TTTCTGACTACGTGTATTTGAGCACTTTAAAATCAATACTAGCAATATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACTACGTGTATTTGAGCACTTTAAAATCAATACTAGCAATATTG  200

seq1  GACAGTGAAAGTGGAAACAAAATATATTCAAATGGGAGGAGAGGCCCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGAAAGTGGAAACAAAATATATTCAAATGGGAGGAGAGGCCCTTG  250

seq1  GTCCTGTGAAGACTCGATGCCCCAGTGTAGGCTAATGCAGGAACCGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGTGAAGACTCGATGCCCCAGTGTAGGCTAATGCAGGAACCGAGAA  300

seq1  GCAGACGTGGGTGGGTTGGTACCAGAGCAGGGGGAGAAGGATTGGTTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACGTGGGTGGGTTGGTACCAGAGCAGGGGGAGAAGGATTGGTTAGG  350

seq1  AGACTTTTCAGAGGGGAAACAAGGAAAGGGGATAAAATTTGAAATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTTCAGAGGGGAAACAAGGAAAGGGGATAAAATTTGAAATATATA  400

seq1  ATAAAAAAAATTCAAAATGTAATTAAATAGCAGTTCATATCTATTCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAAATTCAAAATGTAATTAAATAGCAGTTCATATCTATTCTTTA  450

seq1  TTAAACTTTTGCCATGATGCATTGATCGAGTTCTGAATTAGACCAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTTTTGCCATGATGCATTGATCGAGTTCTGAATTAGACCAAACTT  500

seq1  GCTTTTTTGTTTGTCCTTCACCTGCCTCAGATCTCTCGGTTAATTCTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTGTTTGTCCTTCACCTGCCTCAGATCTCTCGGTTAATTCTGAG  550

seq1  CTCTAATCTTCCTGGCTGCATTATTGAATCTGCTACTTTGATTTTGAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATCTTCCTGGCTGCATTATTGAATCTGCTACTTTGATTTTGAGTC  600

seq1  ATTATCCACTCCCCTTTGCCAAGCTCTGGTTTATAATATCGTGCCCTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCACTCCCCTTTGCCAAGCTCTGGTTTATAATATCGTGCCCTTCA  650

seq1  TGGTTAGATCAGTTTAAGGATCCAAGTGAAACATGTAGAGTGTTCAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAGATCAGTTTAAGGATCCAAGTGAAACATGTAGAGTGTTCAATTT  700

seq1  GAATACATAAAACAATAGAGCAGTAGTTAAAACTGCATGTACCATATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATAAAACAATAGAGCAGTAGTTAAAACTGCATGTACCATATAAA  750

seq1  AACTATGAGCCTTAAAGCATCACTCCATTAGGAAAGGCCAATTAAAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGAGCCTTAAAGCATCACTCCATTAGGAAAGGCCAATTAAAGAAC  800

seq1  GTGGCTCTTTTGCTCTTCCCTGACGGTCATTAGAGCAAAAGTTTGACAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCTTTTGCTCTTCCCTGACGGTCATTAGAGCAAAAGTTTGACAGC  850

seq1  TAAAATTTTTGAATGAATTTCTTATATTGCCTACTTCTGAAAGGACTCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTTTGAATGAATTTCTTATATTGCCTACTTCTGAAAGGACTCTT  900

seq1  ATTCTTTTCATTCCATCACAAAGTTTTAGACAGGATGTTAAATATGAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTCATTCCATCACAAAGTTTTAGACAGGATGTTAAATATGAACT  950

seq1  AAATATTTATATTACTATAAAACTTAATATGAATAAAATGCTTATACACA  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATATTTATATTACTATAAAACTTAATATGAATAAAATGC-TATACACA  999

seq1  CAATTAAAGCTTTTCCTAGAATGTATCTATAAAATCCCTAGCTCTGCTAT  1050
        ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATT-AAGCTTTTCCTAGAATGTATCTATAAAATCCCTAGCTCTGCTAT  1048

seq1  AATGACCCTTGCCACGTTAACTTACAC-TTTTTTCAC-TTTCA-GAAAAT  1097
       ||||||  ||||||||  || ||||| ||||||||| ||||| ||||||
seq2  -ATGACC--TGCCACGT--ACCTACACTTTTTTTCACGTTTCAGGAAAAT  1093

seq1  CCACTATGGG-TTTTGTAAGGTCTAT-GCATCGCCTTTGCCTAGG-CTTG  1144
      |||||||||| |||||| |||||||| |||||||  ||||||||| ||||
seq2  CCACTATGGGATTTTGT-AGGTCTATGGCATCGC--TTGCCTAGGCCTTG  1140

seq1  AT  1146
      ||
seq2  AT  1142


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