BAC Information

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BAC

Clone NameB6Ng01-332P23
Chromosome16 (Build37)
Map Location 20,959,205 - 20,959,934
singlet/doubletsinglet
Overlap genenone
Upstream geneKlhl6, LOC100042938, Klhl24, Yeats2, LOC100043459, Map6d1, Parl, EG224044, Abcc5, Eif2b5, Dvl3, Ap2m1, LOC100042948, Abcf3, BC052055, EG328644, Alg3, 1810009K13Rik, Camk2n2, Ece2, Psmd2, LOC100043475, Eif4g1, 2900046G09Rik, Clcn2, Polr2h, Thpo, Chrd, LOC666255, LOC671504, EG666274, EG625060
Downstream geneLOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332P23.bB6Ng01-332P23.g
ACCGA118936GA118937
length1,088735
definitionB6Ng01-332P23.b B6Ng01-332P23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccaccacagttcagcaggaagcaattataagaaggtcatcatc
ccagtcccttaagttggtgtggacggttttgttcattttatgagttatat
gttgtcattttagggaataattacaaataatattagtcttggacagggcg
gggacaaaatagggaaattacattcaggattcctccctccccacttgtaa
gagaaaggcagttgaaaagaaaaggcgggaatataaacatattctaagat
gtaaaaattagacacataggggtagattattgaactcttaaaccaaaaaa
cattttatagccataatcttacattggtagagatctttatattttgatgc
aacacttagggtatattttatatattgatacagaaataaagttatttttg
atacacatgtacacacacatacatacatatgtatgtatattttaacattt
attttgaggcattgtacttctaaaattcttaaagatgtaatataaagttc
tagtccttttgaaagctgctattataaattgttagtgataataaaaatac
aagttatgaaatatttgtgatggtaaatgagagtcccccgaaatgggagg
gaccctcactcaagccccaggatgacgtgacacccaagaactcacgagag
attggtcttgatgcaaacagcaagaggtttaattgggaaaggccagtgca
ctggggacgactcatatcccacacaggggtagaggagtcgacccagaaat
caaagggtaaggggtttataaaggcagaaaccacaaacacctggcattgg
gctatagcatttggcaagcataacgtgttcaaggaatgttagagtattct
gtaggaacatttcctaaaacaatggagcaatttaaacttctacctttgtg
gttagtacatcctggaacaatgggggtgagttaaacttttactccttgcc
attagtgagatctattttgggatataaatctaggggcttacatattttca
ctcttcctctctcagaatctccagtaaagaaatacaaatttattagccca
gaatagttcaaagttcatggtccatattagatactgag
gaattctgattggatgaggtggggtggagctagatgaggtcagtcagctc
gcgtataggaagttagctgttgttgcccttgcctaagtggttgaggttgt
tgtaagaaaagctgcaagaaggacggagtaaaagaagaggctgctgggga
agagagctgtaggggaaaaagccacaagtaaagaagttgctgcgtgaacc
caccttggtgtccaagttgttcctgtctccacagtaggcgaggacaggga
caaacaacagtgtagatgaacatatgaactcaattgtgacagcacactca
agacatgaacaagctcaaggcagataaaaccccagcatgtgagcacaaag
ttatctccaaatgaaaagcagtttgattgacggcttctacgagagagaaa
tcaagttccctcaatggaatgacactgggtacaacacccacactgcaggg
cgggccccatgctcatgagctgttgctcaacttgtatgccatgattttta
gtggcttttcccctttgttcttaagagagagaatgaatatgaagttaggg
agggagggagaaattataaagaatagacaaataggttatcaaatttactt
cttaaacagaacattatatagccacaatccatttttttccattcaactca
tgactatttcacttcagaaaaatacactgactagatagaataacttttcc
tgtggttttgaaataaatgttatacaacatctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_20959205_20959934
seq2: B6Ng01-332P23.g_70_804

seq1  GAATTCTGATTGGATGAGGTGGGGTGGAGCTAGATGAGGTCAGTCAGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTGGATGAGGTGGGGTGGAGCTAGATGAGGTCAGTCAGCTC  50

seq1  GCGTATAGGAAGTTAGCTGTTGTTGCCCTTGCCTAAGTGGTTGAGGTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATAGGAAGTTAGCTGTTGTTGCCCTTGCCTAAGTGGTTGAGGTTGT  100

seq1  TGTAAGAAAAGCTGCAAGAAGGACGGAGTAAAAGAAGAGGCTGCTGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGAAAAGCTGCAAGAAGGACGGAGTAAAAGAAGAGGCTGCTGGGGA  150

seq1  AGAGAGCTGTAGGGGAAAAAGCCACAAGTAAAGAAGTTGCTGCGTGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCTGTAGGGGAAAAAGCCACAAGTAAAGAAGTTGCTGCGTGAACC  200

seq1  CACCTTGGTGTCCAAGTTGTTCCTGTCTCCACAGTAGGCGAGGACAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGGTGTCCAAGTTGTTCCTGTCTCCACAGTAGGCGAGGACAGGGA  250

seq1  CAAACAACAGTGTAGATGAACATATGAACTCAATTGTGACAGCACACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACAGTGTAGATGAACATATGAACTCAATTGTGACAGCACACTCA  300

seq1  AGACATGAACAAGCTCAAGGCAGATAAAACCCCAGCATGTGAGCACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGAACAAGCTCAAGGCAGATAAAACCCCAGCATGTGAGCACAAAG  350

seq1  TTATCTCCAAATGAAAAGCAGTTTGATTGACGGCTTCTACGAGAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCCAAATGAAAAGCAGTTTGATTGACGGCTTCTACGAGAGAGAAA  400

seq1  TCAAGTTCCCTCAATGGAATGACACTGGGTACAACACCCACACTGCAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTCCCTCAATGGAATGACACTGGGTACAACACCCACACTGCAGGG  450

seq1  CGGGCCCCATGCTCATGAGCTGTTGCTCAACTTGTATGCCATGATTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCCCATGCTCATGAGCTGTTGCTCAACTTGTATGCCATGATTTTTA  500

seq1  GTGGCTTTTCCCCTTTGTTCTTAAGAGAGAGAATGAATATGAAGTTAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTTTTCCCCTTTGTTCTTAAGAGAGAGAATGAATATGAAGTTAGGG  550

seq1  AGGGAGGGAGAAATTAT-AAGAATAGACAAATAGGTTATCAAATTTAC-T  598
      ||||||||||||||||| |||||||||||||||||||||||||||||| |
seq2  AGGGAGGGAGAAATTATAAAGAATAGACAAATAGGTTATCAAATTTACTT  600

seq1  CTTAAACAGAACATTATATAGCCACAATCCA-TTTTTTCCATTCAACTCA  647
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTTAAACAGAACATTATATAGCCACAATCCATTTTTTTCCATTCAACTCA  650

seq1  TGACTATTTCACTTCAG-AAAATACACTGACTAGATAGAAATAAC-TTTC  695
      ||||||||||||||||| |||||||||||||||||||| |||||| ||||
seq2  TGACTATTTCACTTCAGAAAAATACACTGACTAGATAG-AATAACTTTTC  699

seq1  CTGT-GTTTTGAAATAATTGCTATACAACATCTACC  730
      |||| |||||||||||| || ||||||||||||| |
seq2  CTGTGGTTTTGAAATAAATGTTATACAACATCTATC  735