BAC Information

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BAC

Clone NameB6Ng01-347C18
Chromosome16 (Build37)
Map Location 51,044,786 - 51,045,919
singlet/doubletsinglet
Overlap genenone
Upstream geneEG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54, LOC672778, 5330426P16Rik, EG639820
Downstream geneLOC627543, Cblb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347C18.bB6Ng01-347C18.g
ACCGA128855GA128856
length1,0411,149
definitionB6Ng01-347C18.b B6Ng01-347C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcatctgcttcagaactactaagagctggcttcctgagctcat
ctagtgacgagtatctcctagagacctccgctaattgatctttcttcttt
tccctttttcctctttttcttctaatctctctccaggtattcctacctaa
ccttaacttttcctcgggttcaagacccttggaaaggcctgtatacttat
tttgtgtaccatattttctctttgctcctactctctctccccgctttact
tctgatagcttgtcctgaatttcatctagaatcctccctatcttaaccac
ttgataacatgtgaaaaggaacaaaagggctcctaacaccagaaaaaatt
caaggccaaacatattccactttacttctgatagactgtcttgaatttcg
ttagaaagttcaagatcagacttacctcgtaaagctgtactcactggtac
tctcgttccccagctgaaaagttctgaattcatacagttgaatccttctt
aacagtctgctttacgggaacctttattaccgcgacccgcagttctggtt
ctggaatgagggatcttccttgcgccagtcccgagttttttctcgtcccg
gaattcggcaccaattgttattagacgcgttctcacgaccggccaggaag
aacaccacagaccagaatcttctgcggcaaaactttattgcttacatctt
caggagccagggtgcaggaagcaagagagcaagaagcaagagagagagaa
aacgaaaccccgtccctcttaaggagcattctccttcgccttggacgtgt
cactccctgattggctgcagcccatcggccgagttgacgtcacggggaaa
ggcagagcacaagtagtcataagatacccttggcacatgcgcagattatt
tgtttaccacttagaacacagctgtcagcgccatcttgtaacggcgaatg
tgggcgcggctcccaacaaatcttaacatcttggatcatcagtttccaca
cagaaacatgaggcaaacagtcagcacattttttctacagc
gaattcctatttagccttttattctctgtgacttaatcaaatacagcaca
ctgaaatccagcaggaactgacctacttttttagattgccctcctcttta
ggattgagaattcttacatcctagatatattcacatcttcgatttttgtg
cgtcatttgtcttatcagggacaaaagacacagtttgcttctctgctcta
tgacagaagccaagaatctcccgggtcagacacaaaggacagcaatagcc
tgcggtatcagttttgctcggaagatgtgaacagatctgtctacatcaga
gaagacactgatgacaaactaaagacagcattccacccaacaacagatca
gagaaacaatttctccataacattttcttggggtggcgtggggtggggtg
gtgtcaccaagtccattaccccaggagtttgggtgaatagttgcaaacat
gagtgattcaaagtctacagtctcacaggaaagcccctctcctaacaaat
aatgactcacacatgctgaatcctatatgttcagtggccaacttgcaggt
agctccaccggaaagtgttttctccctagccattgttcacagctttcata
aacacaggaaagagccctgaagatcttctagctttctgagcttcataaat
gccctgggtctcaatagctccttaagtcttaggtgcctccctccaccagg
ggatgcttccatttggagcaaatagctactagatatagccaatagtcaga
gtactctaatttttctggtgactatggttcagaccaaaacacccagaaaa
ccaacacctgccttggtgcataaagggcttgtgtgactcactttctgacg
ccacttttgtgctttttctcaggaattgccctgagagaacaagtgaccaa
aacattctgtgtgtgattcattccctgtgatgtctgtgtagaaccatcct
caaattcacgagagaacttattttaccttgtgcttcgtttggattatttt
gctagttgtttcttggagagcattattgggtttttgccagttaacttcat
tttaagctgcattattgggatccaccttttgccccattagcacttacacc
tgaaacctttagtttttggtttaatttcatcctcctaaaggatgtaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_51044786_51045919
seq2: B6Ng01-347C18.g_67_1215

seq1  GAATTCCTATTTAGCCTTTTATTCTCTGTGACTTAATCAAATACAGCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTTAGCCTTTTATTCTCTGTGACTTAATCAAATACAGCACA  50

seq1  CTGAAATCCAGCAGGAACTGACCTACTTTTTTAGATTGCCCTCCTCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATCCAGCAGGAACTGACCTACTTTTTTAGATTGCCCTCCTCTTTA  100

seq1  GGATTGAGAATTCTTACATCCTAGATATATTCACATCTTCGATTTTTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAGAATTCTTACATCCTAGATATATTCACATCTTCGATTTTTGTG  150

seq1  CGTCATTTGTCTTATCAGGGACAAAAGACACAGTTTGCTTCTCTGCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCATTTGTCTTATCAGGGACAAAAGACACAGTTTGCTTCTCTGCTCTA  200

seq1  TGACAGAAGCCAAGAATCTCCCGGGTCAGACACAAAGGACAGCAATAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAGCCAAGAATCTCCCGGGTCAGACACAAAGGACAGCAATAGCC  250

seq1  TGCGGTATCAGTTTTGCTCGGAAGATGTGAACAGATCTGTCTACATCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTATCAGTTTTGCTCGGAAGATGTGAACAGATCTGTCTACATCAGA  300

seq1  GAAGACACTGATGACAAACTAAAGACAGCATTCCACCCAACAACAGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACACTGATGACAAACTAAAGACAGCATTCCACCCAACAACAGATCA  350

seq1  GAGAAACAATTTCTCCATAACATTTTCTTGGGGTGGCGTGGGGTGGGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAATTTCTCCATAACATTTTCTTGGGGTGGCGTGGGGTGGGGTG  400

seq1  GTGTCACCAAGTCCATTACCCCAGGAGTTTGGGTGAATAGTTGCAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACCAAGTCCATTACCCCAGGAGTTTGGGTGAATAGTTGCAAACAT  450

seq1  GAGTGATTCAAAGTCTACAGTCTCACAGGAAAGCCCCTCTCCTAACAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGATTCAAAGTCTACAGTCTCACAGGAAAGCCCCTCTCCTAACAAAT  500

seq1  AATGACTCACACATGCTGAATCCTATATGTTCAGTGGCCAACTTGCAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCACACATGCTGAATCCTATATGTTCAGTGGCCAACTTGCAGGT  550

seq1  AGCTCCACCGGAAAGTGTTTTCTCCCTAGCCATTGTTCACAGCTTTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCACCGGAAAGTGTTTTCTCCCTAGCCATTGTTCACAGCTTTCATA  600

seq1  AACACAGGAAAGAGCCCTGAAGATCTTCTAGCTTTCTGAGCTTCATAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGAAAGAGCCCTGAAGATCTTCTAGCTTTCTGAGCTTCATAAAT  650

seq1  GCCCTGGGTCTCAATAGCTCCTTAAGTCTTAGGTGCCTCCCTCCACCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGGTCTCAATAGCTCCTTAAGTCTTAGGTGCCTCCCTCCACCAGG  700

seq1  GGATGCTTCCATTTGGAGCAAATAGCTACTAGATATAGCCAATAGTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTTCCATTTGGAGCAAATAGCTACTAGATATAGCCAATAGTCAGA  750

seq1  GTACTCTAA-TTTTCTGGTGACTATGGTTCAGACCAAAACACCCAGAAAA  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCTAATTTTTCTGGTGACTATGGTTCAGACCAAAACACCCAGAAAA  800

seq1  CCAACACCTGCCTTGGTGCATAAAGGGCTTGTGTGACTCACTTTCTGACG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACCTGCCTTGGTGCATAAAGGGCTTGTGTGACTCACTTTCTGACG  850

seq1  CCACTTTTGTGC-TTTTCTCAGGAATTGCCCTGAGAGAACAAGTGACCAA  898
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTGTGCTTTTTCTCAGGAATTGCCCTGAGAGAACAAGTGACCAA  900

seq1  AACA-TCTGTGTGTGA-TCA-TCCCTGTGATGTCTGTGTAGAACCATCCT  945
      |||| ||||||||||| ||| |||||||||||||||||||||||||||||
seq2  AACATTCTGTGTGTGATTCATTCCCTGTGATGTCTGTGTAGAACCATCCT  950

seq1  CAAA-TCACGAGAG-ACTTTATTTACCTTGTGCTTCGTTTGGATTA-TTT  992
      |||| ||||||||| ||||  ||||||||||||||||||||||||| |||
seq2  CAAATTCACGAGAGAACTTATTTTACCTTGTGCTTCGTTTGGATTATTTT  1000

seq1  GCTAGTTGTTTCTT-GAGAGCATTATT-GGTTTTTGCAAG-TAACTTCAT  1039
      |||||||||||||| |||||||||||| ||||||||| || |||||||||
seq2  GCTAGTTGTTTCTTGGAGAGCATTATTGGGTTTTTGCCAGTTAACTTCAT  1050

seq1  TTT-AGCTGCATTTATGGTGATCCAC--TTTGCCCCATCTAGAAC-TACA  1085
      ||| ||||||| |||| | |||||||  |||||||||| ||| || ||||
seq2  TTTAAGCTGCA-TTATTGGGATCCACCTTTTGCCCCAT-TAGCACTTACA  1098

seq1  -CTG-AACCTTTAGTTTTT-GTTTTATTTCTATCTCCTATAAGAATGTAG  1132
       ||| |||||||||||||| |||| |||||   |||||| ||| ||||||
seq2  CCTGAAACCTTTAGTTTTTGGTTTAATTTCATCCTCCTA-AAGGATGTAG  1147

seq1  GC  1134
      ||
seq2  GC  1149