BAC Information

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BAC

Clone NameB6Ng01-347N02
Chromosome16 (Build37)
Map Location 12,949,354 - 12,950,391
singlet/doubletsinglet
Overlap genenone
Upstream gene2700045P11Rik, EG622509
Downstream geneLOC622553, Ercc4, Gt4-1, Mkl2, Parn, LOC100043196, 3110001I22Rik, Pla2g10, A930007A09Rik, LOC622757, Rrn3, Ntan1, Pdxdc1, Mpv17l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347N02.bB6Ng01-347N02.g
ACCGA129306GA129307
length1,0371,184
definitionB6Ng01-347N02.b B6Ng01-347N02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccagacaaggtcagaggagaaaccccactaatgaggggagtct
tccattacacaccaagtccagaggctatctggtcaatggtggacttcaac
cttaattaacaggttttcccacaatgatctttccccagagaagcacccaa
ccagtgactgctgagtccaaggagaagcacctgagcccctgtgtccccaa
aaggctatgctctgtactcattacataactccctgatggcagttacaacc
tagtacctgcatgacctagtacctgcatgacatcccttactaactgctct
cttcctttcaaattatgtggcagtggtatttcatataaggcctcaaaaag
ctcctaaactcttttctcaaagactttctttctgggggaccccaatcaaa
agtcatactttacagcaggatcagtaaacctctctaaaaggccagcaaga
aagtgcctgcagtgtatgaggggctgcagagatggctcagcagctaggag
taccaatgctctcgaagaggaccagctcccagacctacatcaggcagctc
ccaaacacctgtgaactccagctccaagagataccacacagggggcatat
tcacatacaggtacacatactacacatgattaaaaatttttaattaaaaa
gaattaaaataaaataaaaagaataaaaggaattaaagctttgaaagcca
gacattctctctcacagtcactgtagggatagtgtttatatgcaatgtaa
gttaagagctcgttggaagcacatgtagcttaaggctgtaagcattgtaa
ataaaaaatagtcccccatgtcattactcaggaatgaagaaggcatagaa
aagtcccatgcttctacaactcatctctgacattctcacaggaaaggtca
ccagagatgataaaggactgagtgagcctgttttcatagattcttactta
tagacactggatttagggtttcattatttcataaacaattgtctctttct
gttgctcagtcattcaaaaatagattaaagctgatca
gaattcagaacttttcagctggggaacgagagtaccagtgagtatgtttg
gccttgaattttttctggtgttaggagcccttttgttctttttcacatgt
tatcaagtgattaagatagggctgaaaattctagaggaaattcaggacaa
gctatcagaagtaaagcgggaagaaagagtaggaacaaagaggaagtatg
gtacacaaaataagtatacaggcctttccaagggtcttgaacccgaggaa
aagttaaggttaggtaggaatacctggagagagattagaagaaaaagagg
aaaaagggaaaagaagaaagatcgattagcggaggtctctaggagatact
cgtcactagatgagctcaggaagccagctcttagtagctctgaagcaagt
gaagaatcctcctctgaggaaacagactgggaggaagaagcagcccatta
ccagccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagtc
agcgtactgttcaacctcccggcagtcggtttcaaggtccgccctatgcg
gagcccccgccctgcgtagtgcgtcagcaatgcgcagagaggcaatgcgc
agagagatgcgcagagaggcagtgcgcagagagatgcgcagagaggcagt
gcgcagagagatgcgcagagaggcagtgcgcagagaggcagtgcgcagag
aggcagtgcgcagactcattcattccccgagaggaacaaaagaaaataca
acaggcatttccagtctttgaaggagccgagggtgggcgtgtccacgctc
cggtagaatacgtacagattaaggaaattgccgagtcggttcgtaaatac
ggaaccaatgctaattttaccttggcgcagttagacaggctcgctggcat
ggcactaacgcctgctgattggcagacggttgtaaaagccgctctcccta
gtatgggcaaatatatggaatggaaagcgctttggcacgaagctgcacag
cgcagcccgagcaaacgcagctgctttgactcagagcagagagattgact
ttgacttgttacgggtcaggagcttattctgctgatcagaacaactacaa
ttggggagcctttgtccgattcttcacgcttatgaggactgagggccttc
tctcgaagacgagggaaacacactgggttacagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12949354_12950391
seq2: B6Ng01-347N02.b_46_1082

seq1  GAATTCCCCAGACAAGGTCAGAGGAGAAACCCCACTAATGAGGGGAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAGACAAGGTCAGAGGAGAAACCCCACTAATGAGGGGAGTCT  50

seq1  TCCATTACACACCAAGTCCAGAGGCTATCTGGTCAATGGTGGACTTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTACACACCAAGTCCAGAGGCTATCTGGTCAATGGTGGACTTCAAC  100

seq1  CTTAATTAACAGGTTTTCCCACAATGATCTTTCCCCAGAGAAGCACCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTAACAGGTTTTCCCACAATGATCTTTCCCCAGAGAAGCACCCAA  150

seq1  CCAGTGACTGCTGAGTCCAAGGAGAAGCACCTGAGCCCCTGTGTCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGACTGCTGAGTCCAAGGAGAAGCACCTGAGCCCCTGTGTCCCCAA  200

seq1  AAGGCTATGCTCTGTACTCATTACATAACTCCCTGATGGCAGTTACAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTATGCTCTGTACTCATTACATAACTCCCTGATGGCAGTTACAACC  250

seq1  TAGTACCTGCATGACCTAGTACCTGCATGACATCCCTTACTAACTGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCTGCATGACCTAGTACCTGCATGACATCCCTTACTAACTGCTCT  300

seq1  CTTCCTTTCAAATTATGTGGCAGTGGTATTTCATATAAGGCCTCAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTCAAATTATGTGGCAGTGGTATTTCATATAAGGCCTCAAAAAG  350

seq1  CTCCTAAACTCTTTTCTCAAAGACTTTCTTTCTGGGGGACCCCAATCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAACTCTTTTCTCAAAGACTTTCTTTCTGGGGGACCCCAATCAAA  400

seq1  AGTCATACTTTACAGCAGGATCAGTAAACCTCTCTAAAAGGCCAGCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATACTTTACAGCAGGATCAGTAAACCTCTCTAAAAGGCCAGCAAGA  450

seq1  AAGTGCCTGCAGTGTATGAGGGGCTGCAGAGATGGCTCAGCAGCTAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCCTGCAGTGTATGAGGGGCTGCAGAGATGGCTCAGCAGCTAGGAG  500

seq1  TACCAATGCTCTCGAAGAGGACCAGCTCCCAGACCTACATCAGGCAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATGCTCTCGAAGAGGACCAGCTCCCAGACCTACATCAGGCAGCTC  550

seq1  CCAAACACCTGTGAACTCCAGCTCCAAGAGATACCACACAGGGGGCATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACCTGTGAACTCCAGCTCCAAGAGATACCACACAGGGGGCATAT  600

seq1  TCACATACAGGTACACATACTACACATGATTAAAAATTTTTAATTAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACAGGTACACATACTACACATGATTAAAAATTTTTAATTAAAAA  650

seq1  GAATTAAAATAAAATAAAAAGAATAAAAGGAATTAAAGCTTTGAAAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAAATAAAATAAAAAGAATAAAAGGAATTAAAGCTTTGAAAGCCA  700

seq1  GACATTCTCTCTCACAGTCACTGTAGGGATAGTGTTTATATGCAATGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTCTCTCACAGTCACTGTAGGGATAGTGTTTATATGCAATGTAA  750

seq1  GTTAAGAGCTCGTTGGAAGCACATGTAGCTTAAGGCTGTAAGCATTGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAGCTCGTTGGAAGCACATGTAGCTTAAGGCTGTAAGCATTGTAA  800

seq1  ATAAAAAATAGTCCCCCATGTCATTACTCAGGAATGAAGAAGGCATAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAATAGTCCCCCATGTCATTACTCAGGAATGAAGAAGGCATAGAA  850

seq1  AAGTCCCATGCTTCTACAACTCATCTCTGACATTCTCACAGG-AAGGTCA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGTCCCATGCTTCTACAACTCATCTCTGACATTCTCACAGGAAAGGTCA  900

seq1  CCAGAGATGATAAAGGACTGAGTGAGCCTGTTTTCATAGATTCTTACTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGATAAAGGACTGAGTGAGCCTGTTTTCATAGATTCTTACTTA  950

seq1  TAGACACTGGATTTAGGGTTTCATTATTTCATAAACAATTGTCTCTTTCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACTGGATTTAGGGTTTCATTATTTCATAAACAATTGTCTCTTTCT  1000

seq1  GTTGCTCAGTCATTCAAAAATAGATTTAAAGCTGGATCA  1038
      |||||||||||||||||||||||| |||||||| |||||
seq2  GTTGCTCAGTCATTCAAAAATAGA-TTAAAGCT-GATCA  1037