Query= MSMg01no049_l18.b1 MSMg01no049_l18.b1 CHROMAT_FILE:
MSMg01no049_l18.b1 PHD_FILE: MSMg01no049_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:03 2005
(573 letters)
>mm_chr16_72950126_72951099
Length = 974
Score = 1025 bits (530), Expect = 0.0
Identities = 560/570 (98%), Gaps = 1/570 (0%)
Strand = Plus / Plus
Query: 1 agattgaactctctgtagctgctgagaaagtttccattgtatgaccagagcgcacagctt 60
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 201 agattgaactctctgtagctgctgagaaagtttccattgtaagtccagagcgcacagctt 260
Query: 61 atactgatggctctttattattaaaattctacacagttttcacgatcacatacatgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atactgatggctctttattattaaaattctacacagttttcacgatcacatacatgattt 320
Query: 121 tttgtggagattgcttccatccaaagtggttttactgtcagttgtttaaggttatcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtggagattgcttccatccaaagtggttttactgtcagttgtttaaggttatcatca 380
Query: 181 gccatcctgttccagggcttcccggaaatatgctgcctaaagagaggcatcatcattcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccatcctgttccagggcttcccggaaatatgctgcctaaagagaggcatcatcattcat 440
Query: 241 tggacatttctcaacactttacatagcctacaaaaagtgctgagacttgtgaagggtaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tggacatttctcaacactttacatagcctacaaaaagtgctgagacttgcgaagggtaaa 500
Query: 301 cagataggccaacagccgagggaggcgatacaggtccacactcatgaaaccacggagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagataggccaacagccgagggaggcgatacaggtccacactcatgaaaccacggagtat 560
Query: 361 gaaaagtgggctcatacattcatagggaaagcgttttcccctggatttgagaggtgttgc 420
||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 gaaaagtagattcatacattcatagggaaagcattttcccctggatttgagaggtgttgc 620
Query: 421 agtttatctctaacggggatttgtaacgtgggaa-cacttgccacttgataaaagcttgg 479
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 agttcatctctaacggggatttgtaacgtgggaaacacttgccacttgataaaagcttgg 680
Query: 480 ggattagatgcactgtgatgtatgtcatattcaaaaggtcagggcagcaggcaagtgacg 539
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggattagatgcactgtggtgtatgtcatattcaaaaggtcagggcagcaggcaagtgacg 740
Query: 540 taagaaaacacccaagtgtcacacagctaa 569
||||||||||||||||||||||||||||||
Sbjct: 741 taagaaaacacccaagtgtcacacagctaa 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 974
Length adjustment: 10
Effective length of query: 563
Effective length of database: 964
Effective search space: 542732
Effective search space used: 542732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_l18.g1 MSMg01no049_l18.g1 CHROMAT_FILE:
MSMg01no049_l18.g1 PHD_FILE: MSMg01no049_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:12:03 2005
(202 letters)
>mm_chr16_72986623_72987223
Length = 601
Score = 325 bits (168), Expect = 1e-93
Identities = 192/200 (96%), Gaps = 1/200 (0%)
Strand = Plus / Minus
Query: 2 tcttaacttgaatattgctttttggattattaaatgataccgacccttcacgagagaata 61
|||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||
Sbjct: 355 tcttaacttgaatattgc-ttttggattattaaatgatgctgacccttcacgagagaata 297
Query: 62 ggtaggaaacataagtagctttcagtgtggaatgagactgccttaggaatacggtatttc 121
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 296 agtaggaaacataagtagctttcagtgtggactgagactgccttaggaatacggtatttc 237
Query: 122 tttccgagtgcaatgtctaagttccccttcatgctctgtgtgtgtgtgtgtgtgtgtgtg 181
| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 236 tctctgagtgcaatgtctaagttccccttcatgctgtgtgtgtgtgtgtgtgtgtgtgtg 177
Query: 182 tgtgtgtgtgtgtgtgtgtg 201
||||||||||||||||||||
Sbjct: 176 tgtgtgtgtgtgtgtgtgtg 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 21
Number of successful extensions: 21
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 601
Length adjustment: 8
Effective length of query: 194
Effective length of database: 593
Effective search space: 115042
Effective search space used: 115042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|