Query= MSMg01no054_l12.b1 MSMg01no054_l12.b1 CHROMAT_FILE:
MSMg01no054_l12.b1 PHD_FILE: MSMg01no054_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:58 2005
(400 letters)
>mm_chr16_76689024_76689822
Length = 799
Score = 710 bits (367), Expect = 0.0
Identities = 388/395 (98%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 1 atgcaaaactgaataaatgacaattataagcacctccacgaacatataaatgaacaggga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 atgcaaaactgaataaatgacaattataagcacctccacgaacatataaatgaagaggga 260
Query: 61 tcgtacaaatattttcttgagggttctcaacctgggaggaatattttatttcccccttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgtacaaatattttcttgagggttctcaacctgggaggaatattttatttcccccttgg 320
Query: 121 attgcaactcatacagcaagtttgttctttcagtttccatagtattagaaagcatgaccc 180
|||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 attgcaac-catacagcaagtttgttctttcagtttccatagtattggaaagcatgaccc 379
Query: 181 agaaaattagaaaatcaaaatgcacactgaatcattcaaaaatgtatatcagctcaagac 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agaaaattagaaaaccaaaatgcacactgaatcattcaaaaatgtatatcagctcaagac 439
Query: 241 tgtcgaaacgggaaaatctaactgagcacctattcaaatggacctcagtatgtcttactt 300
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 440 tgtcgaaacgggaaaatctaactgagcacctattcaaatcgacctcagtaggtcttactt 499
Query: 301 gcaatacctcctcgcatcataggtgaaaaccctctcctaggaataagtgatttaattaat 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 gcaatacctcctcgcatcataggtgaaaaccctctcctaggaataagcgatttaattaat 559
Query: 361 ttacaaagaagtgagggccacatggccttatacct 395
|||||||||||||||||||||||||||||||||||
Sbjct: 560 ttacaaagaagtgagggccacatggccttatacct 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 799
Length adjustment: 9
Effective length of query: 391
Effective length of database: 790
Effective search space: 308890
Effective search space used: 308890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no054_l12.g1 MSMg01no054_l12.g1 CHROMAT_FILE:
MSMg01no054_l12.g1 PHD_FILE: MSMg01no054_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:58 2005
(296 letters)
>mm_chr16_76782546_76783241
Length = 696
Score = 542 bits (280), Expect = e-158
Identities = 292/296 (98%)
Strand = Plus / Minus
Query: 1 cttccaagtctctaaaatgtgcttcaaactcatttgcaggacaaacataatagctgctga 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 496 cttccaagtctctaaaatgtgcttcaaactcatttgcaggacaaaaataatagctgctga 437
Query: 61 atcacagagttctggtcagacaactctgcctcgtgtctgctgtgcagtaattcatagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 atcacagagttctggtcagacaactctgcctcgtgtctgctgtgcagtaattcatagttc 377
Query: 121 tgtttacagagcccatagttctaatacacatgagtgttactccaactcattataaaggga 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 376 tgtttacagagcccatagttctaatacaaatgagtgttactccaactcattagaaaggga 317
Query: 181 gagagatggattctatttgcaaatgttaattagaaaaatctggagttctaggtcagtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gagagatggattctatttgcaaatgttaattagaaaaatctggagttctaggtcagtcct 257
Query: 241 tgaacctccttgtagcactgacaggagggtctttgaaaaaattatttatatggaca 296
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tgaacctccttgtaggactgacaggagggtctttgaaaaaattatttatatggaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
