Query= MSMg01no055_l04.b1 MSMg01no055_l04.b1 CHROMAT_FILE:
MSMg01no055_l04.b1 PHD_FILE: MSMg01no055_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:10 2005
(318 letters)
>mm_chr16_7192801_7193518
Length = 718
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%)
Strand = Plus / Minus
Query: 5 gaattccagaacttcccaggctacacagaggaattctgtctcaaaaagccaaccaaccaa 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gaattccagaacagccaaggctacacagaggaattctgtctcaaaaagccaaccaaccaa 534
Query: 65 ccaaccaaacaatccataaacctgggaggaagtgtagcagggagtgaaaaattcacaaca 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ccaaccaaacaatcaataaacctgggaggaagtgtagcagggagtgaaaaattcacaaca 474
Query: 125 ataatgaacagtacagctggtaccaagaacacaacacctgatgcagtaatcattattagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ataatgaacagtacagctggtaccaagaacacaacacctgatgcagtaatcattattagt 414
Query: 185 agggtgggctacacaaagtttacctgctgtgaatcctttatagcacaattggtgtgagcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agggtgggctacacaaagtttacctgctgtgaatcctttatagcacaattggtgtgagcc 354
Query: 245 cacaatgagtgtgatcaatcagttgatctccttcagtgcaatgtccctactatgggctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 cacaatgagtgtgatcaatcagttgatctccttcagtgcaatgtccctactatgggctga 294
Query: 305 gaactctgtgtgat 318
||||||||||||||
Sbjct: 293 gaactctgtgtgat 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_l04.g1 MSMg01no055_l04.g1 CHROMAT_FILE:
MSMg01no055_l04.g1 PHD_FILE: MSMg01no055_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:10 2005
(517 letters)
>mm_chr16_7034647_7035563
Length = 917
Score = 1000 bits (517), Expect = 0.0
Identities = 517/517 (100%)
Strand = Plus / Plus
Query: 1 tggtccccttgcctcacacttcccatttgtgtgctgaacgtggtgactcatccctctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtccccttgcctcacacttcccatttgtgtgctgaacgtggtgactcatccctctaat 260
Query: 61 tccagcaactgagaggttgaggcaggaggattggtgtgagtgcaacgtgagcctaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccagcaactgagaggttgaggcaggaggattggtgtgagtgcaacgtgagcctaaataa 320
Query: 121 aaaagcaagatcagatatcgaaaaatttaaaaatataaaaaataaaaattaaacataacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagcaagatcagatatcgaaaaatttaaaaatataaaaaataaaaattaaacataacc 380
Query: 181 aagaggcaagacattgtagtgtgtgctcctgggatctgtgggcagcacaggcttctgctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaggcaagacattgtagtgtgtgctcctgggatctgtgggcagcacaggcttctgctc 440
Query: 241 ctgccctgtgggcatggcttccttttaggcataggcctcctaacacccaggatgagttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgccctgtgggcatggcttccttttaggcataggcctcctaacacccaggatgagttta 500
Query: 301 agggttctttgtacaggcagagtttgatctctagaatggaccctgtccttaaatgcaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggttctttgtacaggcagagtttgatctctagaatggaccctgtccttaaatgcaaag 560
Query: 361 caattgtatctgtaaagttggaatgggctcctttgctggagaagcagcccattgctcagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caattgtatctgtaaagttggaatgggctcctttgctggagaagcagcccattgctcagg 620
Query: 421 atgagctcatctgagtgagtctgtggtagtatcattggtgactcaggactacggagtgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgagctcatctgagtgagtctgtggtagtatcattggtgactcaggactacggagtgat 680
Query: 481 gcttccacctggagaactgtgtatgacaatggatctt 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttccacctggagaactgtgtatgacaatggatctt 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
