Query= MSMg01no055_m09.b1 MSMg01no055_m09.b1 CHROMAT_FILE:
MSMg01no055_m09.b1 PHD_FILE: MSMg01no055_m09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:16 2005
(447 letters)
>mm_chr16_65599002_65599848
Length = 847
Score = 627 bits (324), Expect = 0.0
Identities = 382/402 (95%), Gaps = 2/402 (0%)
Strand = Plus / Minus
Query: 1 catcgaatatgtttctatatttaagtcaggtacaaacaaatctgaaattggtaagtgcaa 60
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 400 catcgaatatgtttctatctttaagtcaggtacaaacaaatctgaaactggtaagtgcaa 341
Query: 61 tataacataaaaatgtcatagtgtaggtaaaatttccccattctagggaaaggatttcat 120
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 340 tatcacataaaaatgtcatagtgtaggtaaaatttccccattctagggaaagcatttcat 281
Query: 121 gggctgtctctttctggaatataaaactaataatatctgcattgttatgagcttatgaag 180
||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||
Sbjct: 280 gggctgtctctttctggaatataaaaccaataatatctgcattgttatgggcttataaag 221
Query: 181 caaacatgcattatagatcagctgggaatgtacttcagtcgatagatgcttttcttcctt 240
||||| ||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 220 caaacttgctttagagatcagctgggaacgtacttcagttgatagatgcttttcttcctt 161
Query: 241 gcacaaagtagcattgcatgacctaaatgtggtgaaatatgtctctaattccagtattta 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 160 gcacaaagtagcattgcatgacctaaatgtggtgaaat--gtctctaattccagtattta 103
Query: 301 aaaggtggagatagaaccatcagaagttcaagactgtcctcagctacacagaaaggccaa 360
|||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 102 gaaggtgaagatagaaccatcagaagttcaagacagtcctcagctacacagaaaggctaa 43
Query: 361 cttgactaggtacttcatttcaaaaaaattaaataaatgaat 402
|||||||||||||| ||||||||||||||||||||||||||
Sbjct: 42 tttgactaggtactttatttcaaaaaaattaaataaatgaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_m09.g1 MSMg01no055_m09.g1 CHROMAT_FILE:
MSMg01no055_m09.g1 PHD_FILE: MSMg01no055_m09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:16 2005
(303 letters)
>mm_chr16_65498452_65499153
Length = 702
Score = 518 bits (268), Expect = e-151
Identities = 292/300 (97%), Gaps = 1/300 (0%)
Strand = Plus / Plus
Query: 1 agctttcttgagcatgcatagaactctgtccctgattgctgcttagccttttttgtatcc 60
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 agctttc-tgagcatgcatagaactttgtccctgattgctgcttagccttttttgtatcc 259
Query: 61 ttcacccagttgtacaaggaccactcttaaaacttgatttcttgaaatgtttactttcta 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 260 ttcacccagttgtacaaggaccactcttaaaacttgattgcttgaaatgtttactttcta 319
Query: 121 attcttaatatttgatggtggatgttccttctctgccttgaaaaaccaaggcaccctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 attcttaatatttgatggtggatgttccttctctgccttgaaaaaccaaggcaccctcta 379
Query: 181 ccactcatctgctggatggctattcatgttctactgttcttgcacgcaacctgacttggt 240
|| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 380 cctctcatctgctggatggctattcatgttctactgctcttgcgcgcaacctgacttggt 439
Query: 241 agcaagaatgatgttgcaacaggatccttctgcacacatttatcggcagagcttgattgc 300
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 440 agcaagaatgatgttgcaacaggatccttctgcacacatttattgggagagcttgattgc 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 702
Length adjustment: 9
Effective length of query: 294
Effective length of database: 693
Effective search space: 203742
Effective search space used: 203742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
