Query= MSMg01no058_i22.b1 MSMg01no058_i22.b1 CHROMAT_FILE:
MSMg01no058_i22.b1 PHD_FILE: MSMg01no058_i22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:50 2005
(502 letters)
>mm_chr7_137123421_137124322
Length = 902
Score = 841 bits (435), Expect = 0.0
Identities = 486/503 (96%), Gaps = 2/503 (0%)
Strand = Plus / Plus
Query: 1 aaaaaaagaccaagctagagttgaggccagaatgtgaatctctacacccttagccaggag 60
||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||
Sbjct: 201 aaaaaaagaccaagctagagttgaggctagaatgtgaatctctacaaccttagccgggag 260
Query: 61 aaagatgtttaaacaacaggactgacgagagaagctcctgaattctgtgcatgttcccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagatgtttaaacaacaggactgacgagagaagctcctgaattctgtgcatgttcccta 320
Query: 121 cacattgctattaactttccatcccatcttctgggaagaaattgcagatagatcaaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 cacattgctattaactttccatcccatcttctgggaagaaattgcagatagataaaagtt 380
Query: 181 ccttccatggtctactggcctgtcctggcaagtctcctgtcactaagggggataatccca 240
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctccatggtctactggccagtcctggcaagtctcctgtcactaagggggataatccca 440
Query: 241 gaatactttatcagacactcctgagagtgactaagatggaacgagccaccctggtcaggt 300
|||| ||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct: 441 gaattctttaccagacactcctgagagtgactgagagggcacgagccaccctggtcaggt 500
Query: 301 aaagtgacccatagtttatagcagttagtttcactggtcaacctggctgggccatactac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaagtgacccatagtttatagcagttagtttcactggtcaacctggctgggccatactac 560
Query: 361 ctactcatttggtcaaatatcatagatgtttcta-ggaagatatatttttcatgacagta 419
||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| ||||
Sbjct: 561 ctactcatttggtcaaacatcatagatgtttctaagga-gatatatttttcatgagagta 619
Query: 420 atactttcatcaatagacttctaatgaaaattattctccacagcgttgatgtgcttcatc 479
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 620 atactttcatcaatagacttctaatgaaaattattctccacagtgttgatgggcttcatc 679
Query: 480 caaaaaagtcaagacactaataa 502
|||||||||||||||||||||||
Sbjct: 680 caaaaaagtcaagacactaataa 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_i22.g1 MSMg01no058_i22.g1 CHROMAT_FILE:
MSMg01no058_i22.g1 PHD_FILE: MSMg01no058_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:50 2005
(417 letters)
>mm_chr16_16709167_16709983
Length = 817
Score = 791 bits (409), Expect = 0.0
Identities = 415/417 (99%)
Strand = Plus / Minus
Query: 1 gtcaatgtcattaatagagttctttctctgtgtcttctttcaaggattgatcattgggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtcaatgtcattaatagagttctttctctgtgtcttctttcaaggattgatcattgggcc 558
Query: 61 caggcccgtggttcctaaaccacaggcctgtgttcggcctggtacagcagaactgctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caggcccgtggttcctaaaccacaggcctgtgttcggcctggtacagcagaactgctgca 498
Query: 121 gggggaaccaggccagaagaggcagtgtatacaaccttttgttacctgtcagacacctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gggggaaccaggccagaagaggcagtgtatacaaccttttgttacctgtcagacacctcc 438
Query: 181 accaaccaggactccatctctgtaaccccatctcctacagagtgtgagtaattagttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 437 accaaccaggactccatctctgtaaccccatctcctacagagtgtgagtaattagctctc 378
Query: 241 tactctttgacatcattgttccctatgcactagtgcatggacaaagaagtcatacacata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tactctttgacatcattgttccctatgcactagtgcatggacaaagaagtcatacacata 318
Query: 301 aacttcctgctatgaagagacagccatcctgactctgcagtccaggtgagagaattacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aacttcctgctatgaagagacagccatcctgactctgcagtccaggtgagagaattacat 258
Query: 361 ttcccacctgattcatcatctttccatgctgtagcccctgtggtacctggctcaaac 417
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 257 ttcccacctgattcatcatctttccatgctgtagcccctgtggtacctggttcaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
