Query= MSMg01no059_e14.b1 MSMg01no059_e14.b1 CHROMAT_FILE:
MSMg01no059_e14.b1 PHD_FILE: MSMg01no059_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:45 2005
(518 letters)
>mm_chr16_70685964_70686883
Length = 920
Score = 901 bits (466), Expect = 0.0
Identities = 503/516 (97%), Gaps = 4/516 (0%)
Strand = Plus / Plus
Query: 5 gaattctctagtcc-tactcacaatctctttcc-taatcctcaccaaaacaatacttcac 62
|||||||||||||| | ||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 205 gaattctctagtccaaagtcataatctctttccataatcctcaccaaaacaatacttcac 264
Query: 63 tcctcgtaccaatctgtcttatttaggactacttttgctttggtaaaaaaaaaaaaagtt 122
||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||
Sbjct: 265 tcctcgtaccaatctgtcttagttaggactacttttgctttggt--aaaaaaaaaatgtt 322
Query: 123 ctatatattgggcttacacttctacattatagcccattattgaaggaactcaggtgagga 182
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctatatattgggtttacacttctacattatagcccattattgaaggaactcaggtgagga 382
Query: 183 actcctacaagtttggaatctggaggcagaagctgatgcagagggcatggaagggtactg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 actcctacaagtttggaatctggaggcagaagctgatgcagagggcatggaagggtactg 442
Query: 243 cttactggcttgttcagcctgcttttgtaagactcacagtgagccttagctattgggaga 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttactggcttgttcagcctgcttttgtaagactcacagtgagccttagctattgggaga 502
Query: 303 tccccaaatgagactggagactggagttaggtgaaaagcaagaaatttattgttttatcg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tccccaaatgagactggagactggagttaggtgaaaagcaagaaatttattgttttatcg 562
Query: 363 cactagggccgccctgcacccagaggagaggtgacccccttctctttcttttataagctt 422
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cactagggttgtcctgcacccagaggagaggtgacccccttctctttcttttataagctt 622
Query: 423 tttatacaaaatttgaggccagattatagcaactgcaactaggcacgtaatggttggtgg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tttatacaaaatttgaggccagattatagcaactgcaactaggcacgtaatggttggtgg 682
Query: 483 ttctggtgacctttatattaattggctgggcaggga 518
||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttctggtgacctttatattaattggctgggcaggga 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 920
Length adjustment: 10
Effective length of query: 508
Effective length of database: 910
Effective search space: 462280
Effective search space used: 462280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_e14.g1 MSMg01no059_e14.g1 CHROMAT_FILE:
MSMg01no059_e14.g1 PHD_FILE: MSMg01no059_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:45 2005
(652 letters)
>mm_chr16_70795073_70796124
Length = 1052
Score = 1183 bits (612), Expect = 0.0
Identities = 642/652 (98%)
Strand = Plus / Minus
Query: 1 ccctagttactcctctcagagatcagagaacctgtattgcatggaggtatacgttctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ccctagttactcctctcagagatcagagaacctgtattgcatggaggtatacgttctgtg 793
Query: 61 cctctgagtaatgtgaaaattcagggacatctgtaattctcccagcaatggtttcctaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 792 cctctgagtaatgtcaaaattcagggacatctgtaattctcccagcaatggtttcctgag 733
Query: 121 gatgcccacatccttagtgtttcagcaaagcaagctacccaggagtgagcttctgtatta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 732 gatgcccacatccttagtgtttcagcaaagcaagctacccaggagtgagcttctatatta 673
Query: 181 gcgttctcagctgcagcttaaaactgaaacttaacacgcaatacaggatggaggatgcca 240
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct: 672 gcgttctcagctgcagcttaaaactggaacttaacacacaatacaggatggaggatgcca 613
Query: 241 ctgaaaagatgcacactgtcttcctgcgcaggcctactttgcttatgacagcaggctttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 ctgaaaagatgcacactgtcttcctgcgcaggcctactttgcttatgacagcaggctttg 553
Query: 301 gtggagaaggtatcatgtacaaagcaaatgaccagttctctctcaccggatgggcagtgc 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 552 gtggagaaggtatcatgtacaaagcaaatgaccagttctctctcagtggatgggcagtgc 493
Query: 361 ttataagatgggagatgaatcacaattgaggccttcaaagatgtaggagaaataggtcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttataagatgggagatgaatcacaattgaggccttcaaagatgtaggagaaataggtcat 433
Query: 421 tccaggacccaagattgaaagaaagaatcgagaaataatatatttccacaggtcacgcac 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 432 tccaggacccaagattgaaagaaagaatcaagaaataatatatttccacaggtcacgcac 373
Query: 481 catgccgcagtgaacaagatcaattcatgcagcagggtagcaggatctaaaattccaaat 540
||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 372 catgccgcaatgaacaagatcaattcatgcagcagggtagcaagatctaaaattccaaat 313
Query: 541 aaatccacgagacagtggcacctagaaattgtacctgattcttggagaaaattgatgtaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaatccacgagacagtggcacctagaaattgtacctgattcttggagaaaattgatgtaa 253
Query: 601 tgtgacatagggacagtgaagccaacgaagttcttattgtaatgatagaact 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgtgacatagggacagtgaagccaacgaagttcttattgtaatgatagaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
