TTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATAAGTTTCACATTGTACACTGGCGTTTGTATGGAGTGGCAAAC
AACATATGAATGTTTAACTAATATATGATTACTTTCTTTATTCTTCTTGT
TCAAGGGATGAGGTTGAAAGAGGTTTGGTACAGGAAAGCAGGAAGGAAAG
ACACACTGAAGCTTTGGTAGATGTCTGTCAAAGCAAAATAAAGCCACACC
GCAAGGCAGGGGACTGCTTTCTTCATTTTATTTCAAAAGTACACAAGGTC
ACAAAACTAAGAGCAAGTTTCTGTTTTTAGACAAAACTGTTCTTACAAAC
TTTGAAATCTGCATCATTGAATATGTAATCCAGATATTTGAAATACAAAA
TCTGAAACTGACACTATAACTTTGCAAATGTGGGTGTCAAATTAGTGTTC
TTAATACAACTGTGTTTATTGCCAAAATTCACGATTAGGGACAAGAATAA
GTCAGTTGGTGAACTGTGGTCCTTCTCAGCACCTGTGTCATTAAACAAAT
TAGCAGAAATCCCAAAGCTCGTCTTTGGCAGACTTCTTAGTGTCTGAATC
AACAACAAGCCCAACTGATGGCCTCTATTCTCTAAATTACAAACTGGGAC
ATAGTTTGTAAGCCTGAACTTACNATTTAAGGTCCCATTCAAGGAAGGTA
AACAAATGGTCAGCCCTTCCTAAGGAGAAATAACC

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCACTAGAGGAATACCGAATGGCAGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCGGGGAAATGCAAAT
CAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCA
AAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATC
AGTCTGGCAGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAG
CAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAG
GACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATACAATTTGCTA
AACACATGAAACTCAAGAATGAAGACTGAAGTGTGGA

Query= MSMg01no061_n17.b1 MSMg01no061_n17.b1 CHROMAT_FILE:
MSMg01no061_n17.b1 PHD_FILE: MSMg01no061_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:57 2005
         (603 letters)



>mm_chr16_78340411_78341411
          Length = 1001

 Score = 1110 bits (574), Expect = 0.0
 Identities = 593/600 (98%), Gaps = 2/600 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccataagtttcacattgtacactggcgtttgtatggagtggcaaacaacatatg 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggaattccataagcttcacattgtacactggcgtttgtatggagtggcaaacaacatatg 742

                                                                       
Query: 64  aatgtttaactaatatatgattactttctttattcttcttgttcaagggatgaggttgaa 123
           |||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||
Sbjct: 741 aatgtttaactaatatatgat--ctttctttattctccttgttcaagggatgaggttgaa 684

                                                                       
Query: 124 agaggtttggtacaggaaagcaggaaggaaagacacactgaagctttggtagatgtctgt 183
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agaggtttggtacaggaaagctggaaggaaagacacactgaagctttggtagatgtctgt 624

                                                                       
Query: 184 caaagcaaaataaagccacaccgcaaggcaggggactgctttcttcattttatttcaaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 caaagcaaaataaagccacaccgcaaggcaggggactgctttcttcattttatttcaaaa 564

                                                                       
Query: 244 gtacacaaggtcacaaaactaagagcaagtttctgtttttagacaaaactgttcttacaa 303
           ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 563 gtacacaaggtcacaaaactaagagcaaggttctgtgtttagacaaaactgttcttacaa 504

                                                                       
Query: 304 actttgaaatctgcatcattgaatatgtaatccagatatttgaaatacaaaatctgaaac 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actttgaaatctgcatcattgaatatgtaatccagatatttgaaatacaaaatctgaaac 444

                                                                       
Query: 364 tgacactataactttgcaaatgtgggtgtcaaattagtgttcttaatacaactgtgttta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgacactataactttgcaaatgtgggtgtcaaattagtgttcttaatacaactgtgttta 384

                                                                       
Query: 424 ttgccaaaattcacgattagggacaagaataagtcagttggtgaactgtggtccttctca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttgccaaaattcacgattagggacaagaataagtcagttggtgaactgtggtccttctca 324

                                                                       
Query: 484 gcacctgtgtcattaaacaaattagcagaaatcccaaagctcgtctttggcagacttctt 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcacctgtgtcattaaacaaattagcagaaatcccaaagctcgtctttggcagacttctt 264

                                                                       
Query: 544 agtgtctgaatcaacaacaagcccaactgatggcctctattctctaaattacaaactggg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agtgtctgaatcaacaacaagcccaactgatggcctctattctctaaattacaaactggg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1001
Length adjustment: 10
Effective length of query: 593
Effective length of database: 991
Effective search space:   587663
Effective search space used:   587663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)