Query= MSMg01no065_e04.b1 MSMg01no065_e04.b1 CHROMAT_FILE:
MSMg01no065_e04.b1 PHD_FILE: MSMg01no065_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:43 2005
(232 letters)
>mm_chr16_41018184_41018816
Length = 633
Score = 375 bits (194), Expect = e-108
Identities = 221/230 (96%), Gaps = 1/230 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatggttaataccctataaaactgcacatgtaccgaattagattactttcactt 63
|||||||| |||||| | ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 379 ggaattcaaggttaagaaactataaaactgcacatgtagcgaattagattactttcactt 320
Query: 64 gggttatcaattttttattttgtga-taaatagaattattttaaggccaaactttgttta 122
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 319 gggttatcaattttttattttgtgattaaatagaattattttaaggccaaactttgttta 260
Query: 123 tgtggcacatctaacatggaatcgcttcgaataacataatggaaaattcacgtttagtgt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtggcacatctaacatggaatcgcttcgaataacataatggaaaattcacgtttagtgt 200
Query: 183 gtgtgtgagtatgtgtgtgtatgtggagggggtaaatgtgtgaatgtata 232
||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct: 199 gtgtgtgagtatgcgtgtgtatgtggagcgggtagatgtgtgaatgtata 150
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 633
Length adjustment: 9
Effective length of query: 223
Effective length of database: 624
Effective search space: 139152
Effective search space used: 139152
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no065_e04.g1 MSMg01no065_e04.g1 CHROMAT_FILE:
MSMg01no065_e04.g1 PHD_FILE: MSMg01no065_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:43 2005
(509 letters)
>mm_chr16_40910498_40911406
Length = 909
Score = 953 bits (493), Expect = 0.0
Identities = 505/509 (99%)
Strand = Plus / Plus
Query: 1 tcagggtcaatagttagttagggagacaacagttttaaatgccctgtctaatgttaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagggtcaatagttagttagggagacaacagttttaaatgccctgtctaatgttaaatg 260
Query: 61 aaggtaataatgtgttaccaacaaaaaataaaattccatttgttgagacagaagccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggtaataatgtgttaccaacaaaaaataaaattccatttgttgagacagaagccagaa 320
Query: 121 tatgactatctccagacttactttgatggaacctggccttgggttgttaaagttcattag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgactatctccagacttactttgatggaacctggccttgggttgttaaagttcattag 380
Query: 181 aggctcacaaatggctagacagtaataaaacctaagatcgtaaggcagcttcacgcaagt 240
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 aggctcaaaaatggctagacagtaataaaacctaagatcataaggcagcttcacgcaagt 440
Query: 241 taaaagtacgttctttgaaagaaacaaaaatgtttcctatcaatgacatctaaagaatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaagtacgttctttgaaagaaacaaaaatgtttcctatcaatgacatctaaagaatta 500
Query: 301 tttatagacaaattgcaactgcaaacctgtttgcaacctttgtcttaaactggaaatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttatagacaaattgcaactgcaaacctgtttgcaacctttgtcttaaactggaaatgac 560
Query: 361 cacaggaatcccaaatgtctttggtccctcctttgcaggtgtttatctggaaggcaccat 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 cacaggaatcccaaatgtctttggtccttcctttgcaggtgtttatctggaaggcaccat 620
Query: 421 gaatggccataagtagggtcatggctgcatgaacactgaatttatgaatatggttgggac 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaatggccataaggagggtcatggctgcatgaacactgaatttatgaatatggttgggac 680
Query: 481 aatatacaagtattcaaagtgaaatctag 509
|||||||||||||||||||||||||||||
Sbjct: 681 aatatacaagtattcaaagtgaaatctag 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space: 448601
Effective search space used: 448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
