Query= MSMg01no067_a03.b1 MSMg01no067_a03.b1 CHROMAT_FILE:
MSMg01no067_a03.b1 PHD_FILE: MSMg01no067_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:59 2005
(500 letters)
>mm_chr16_43269005_43269905
Length = 901
Score = 907 bits (469), Expect = 0.0
Identities = 490/497 (98%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 5 gaattctttagagatatcgatgattgagaatctgggattctcacagatctaaccatgagg 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gaattctttagagagattgatgattgagaatctgggattctcacagatctaaccatgagg 642
Query: 65 ttttataaaggatggcacacctagcccccattttagaacaaatagttcagatctctagaa 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttttataaaggatgggacacctagcccccattttagaacaaatagttcagatctctagaa 582
Query: 125 tctag-aaaaaattctctatgctctaagttagtaggtgatatgagtatagagttgagaag 183
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 581 tctagaaaaaaattctctatgctctaagttagtaggtgatatgagtatagagttaagaag 522
Query: 184 aagtgctgaatcagctagatagtataccagctgtatttgcaaaagatttatcaaaacaag 243
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aagcgctgaatcagctagatagtataccagctgtatttgcaaaagatttatcaaaacaag 462
Query: 244 ccattgttaagggaaatgaggcctgctattgttgtaggaaatctcttaattagaagttaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ccattgttaagggaaatgaggcctgctattgttgtaggaaatctcttaattagaagttaa 402
Query: 304 gaagctctttctagtagaaaatatgtctgcaaagggcagtagaggagaaggcagacgatg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaagctctttctagtagaaaatatgtctgcaaagggcagtagaggagaaggcagacgatg 342
Query: 364 aactagacagatgtatggtggcattgcttgtattgttctaggtcatccccttgaaagtga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aactagacagatgtatggtggcattgcttgtattgttctaggtcatccccttgaaagtga 282
Query: 424 aggcctactgattgagatgatcacatggtcacatcagagcttacaactatataatttaca 483
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 281 aggcctactgattgagatgatcacatgatcacatcagagcttacaactatataatttaca 222
Query: 484 acgactgttgcctgaca 500
|||||||||||||||||
Sbjct: 221 acgactgttgcctgaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 901
Length adjustment: 10
Effective length of query: 490
Effective length of database: 891
Effective search space: 436590
Effective search space used: 436590
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_a03.g1 MSMg01no067_a03.g1 CHROMAT_FILE:
MSMg01no067_a03.g1 PHD_FILE: MSMg01no067_a03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:00 2005
(437 letters)
>mm_chr16_43173152_43173988
Length = 837
Score = 806 bits (417), Expect = 0.0
Identities = 432/437 (98%)
Strand = Plus / Plus
Query: 1 ccatagaaaaagaaatagaagcatatttcaggaaaactctaagagattaccccgatgatt 60
|||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 201 ccatagaaaaagggatagaagcatatttcaggaaaactctaagagattagccagatgatt 260
Query: 61 aggccaggacattttaagttcagattttatgtagaatttctatggcattattttagttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggccaggacattttaagttcagattttatgtagaatttctatggcattattttagttga 320
Query: 121 ctgaagaatgctagaaaatctaaagatatttcaaattaaaaatatctttttattacccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaagaatgctagaaaatctaaagatatttcaaattaaaaatatctttttattacccta 380
Query: 181 tgatttctctaaattgttttcttaagatgtagtcagaactcatattgatttgtaaactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgatttctctaaattgttttcttaagatgtagtcagaactcatattgatttgtaaactca 440
Query: 241 aaggcaactgataaaccaattaaattaatctaatggaaccattctcccataattttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggcaactgataaaccaattaaattaatctaatggaaccattctcccataattttgaaa 500
Query: 301 gaatccgatttatatctagtgaactctcatggtagcaatcttttcattcggattttgttc 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 gaatccgatttatatctagtgaactctcatggtaacaatcttttcattcggattttgttc 560
Query: 361 agttccatggacattaagtaaatgtatagtatgtgtaaagtactatagtagatacttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttccatggacattaagtaaatgtatagtatgtgtaaagtactatagtagatacttttg 620
Query: 421 gtagttctgcatattgc 437
|||||||||||||||||
Sbjct: 621 gtagttctgcatattgc 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
