Query= MSMg01no072_f08.b1 MSMg01no072_f08.b1 CHROMAT_FILE:
MSMg01no072_f08.b1 PHD_FILE: MSMg01no072_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:02 2005
(618 letters)
>mm_chr16_51819409_51820426
Length = 1018
Score = 1141 bits (590), Expect = 0.0
Identities = 608/614 (99%)
Strand = Plus / Minus
Query: 5 gaattcaattgaatgccagcttgcattgacagtgctttgcacccactacgtacgttacta 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gaattcaattgaatgcaagcttgcattgacagtgctttgcacccactacgtacgttacta 555
Query: 65 aaatccttttttcttcctatagaaatcttgtgctgttccaatccctttattctctgcatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aaatccttttttcttcctatagaaatcttgtgctgttccaatccctttattctctgcatt 495
Query: 125 gttgcaccacaaacacctagtttaaactgacacacaatgccatttttgaaagcctctgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 gttgcaccacaaacacctagtttaaactgacacacaatgccatttttgaaagcctctgaa 435
Query: 185 gggctattcatttgagtacatgttgtagcaaagggaacaacctggcaccccctatacaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gggctattcatttgagtacatgttgtagcaaagggaacaacctggcaccccctatacaag 375
Query: 245 cattttgcactaggtaaacaatgacatttatagttttttcaaaactgatatttgagattc 304
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 374 cattttgcactaggtaaacaatgacatttatagtcctttcaaaactgatatttgagattc 315
Query: 305 taaattttaaagtaaatttgaaagaaatagatttcttttgttctaaagactagtacaaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 taaattttaaagtaaatttgaaagaaatagatttcttttgttctaaagactagtacaaca 255
Query: 365 tcaacttcatatatttaaaaaaacatttttgcagtttaaaaagatacatgtaatatataa 424
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 254 tcaacttcatatattaaaaaaaacattgttgcagtttaaaaagatacatgtaatatataa 195
Query: 425 taatcaaaatatacatttatataaagcttagcatatacaactactattttctttcattat 484
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 194 taatcaaaatatacatttataaaaagcttagcatatacaactactattttctttcattat 135
Query: 485 atactgcaataagaatagttttgtatccacctttcttcacttaatatagagcaaattgag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atactgcaataagaatagttttgtatccacctttcttcacttaatatagagcaaattgag 75
Query: 545 gaaaggcaggcaggtagaaaattatagtcatatcgcttaccttttgttcaattttgacat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gaaaggcaggcaggtagaaaattatagtcatatcgcttaccttttgttcaattttgacat 15
Query: 605 ctttctttgtagtg 618
||||||||||||||
Sbjct: 14 ctttctttgtagtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_f08.g1 MSMg01no072_f08.g1 CHROMAT_FILE:
MSMg01no072_f08.g1 PHD_FILE: MSMg01no072_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:02 2005
(637 letters)
>mm_chr16_51672301_51673338
Length = 1038
Score = 1193 bits (617), Expect = 0.0
Identities = 632/637 (99%), Gaps = 1/637 (0%)
Strand = Plus / Plus
Query: 1 attacatttaagagatataaaagttacaaaatgttcagtaaaaacactgtgacaaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacatttaagagatataaaagttacaaaatgttcagtaaaaacactgtgacaaatttt 260
Query: 61 tttggttcaaagttttcatcttcctcttctgtctttgaatcatgaagaaacctgttttaa 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 261 tttggttcaaagttttcatcttcctcttctgtcttcgaatcatgaagaaacctattttaa 320
Query: 121 taattccttttagtagtttctctaatatctagaaataattaagctaagcacacttactta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattccttttagtagtttctctaatatctagaaataattaagctaagcacacttactta 380
Query: 181 atttttt-atttttccttggttccctcttacttgaaagaaataatcaaagaagaatccac 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttttttatttttccttggttccctcttacttgaaagaaataatcaaagaagaatccac 440
Query: 240 aggaaataaacaactatgagaatcattatgaattacttctttaattcactatacatcagc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggaaataaacaactatgagaatcattatgaattacttctttaattcactatacatcagc 500
Query: 300 tctcacaggtaccacttactgcactgacatttctgtcctataataataattgatactcag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcacaggtaccacttactgcactgacatttctgtcctataataataattgatactcag 560
Query: 360 ttttgccagttcagggtctgcctatgttttggagaaatggtattgaaccaatttgaagtc 419
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 ttttgccagttcagggtctgcctatgttttggaaaaatggtattgaaccaatttgaagtc 620
Query: 420 tttattaataaatttattttgatctcctctccatttctctttattgatttcatacatttg 479
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 tttattaataaatttattttgatctcctctccatttctttttattgatttcatacatttg 680
Query: 480 tataattttagaaattaaatttgcccatgaccttaaagaatgtgtaggtcatcatatcaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tataattttagaaattaaatttgcccatgaccttaaagaatgtgtaggtcatcatatcaa 740
Query: 540 agtaatgaatgacagcatcagccctgcagttacaatctgctgttggccaactaactaaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtaatgaatgacagcatcagccctgcagttacaatctgctgttggccaactaactaaaa 800
Query: 600 ccctctacggtaggctccctacaagatctacctactg 636
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccctctacggtaggctccctacaagatctacctactg 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
