Query= MSMg01no074_p05.b1 MSMg01no074_p05.b1 CHROMAT_FILE:
MSMg01no074_p05.b1 PHD_FILE: MSMg01no074_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:29 2005
(337 letters)
>mm_chr16_12058170_12058907
Length = 738
Score = 561 bits (290), Expect = e-164
Identities = 305/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 29 gaattccttcttttcatattcttatttgggaatttcttctctaggagagatgtatgcatg 88
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 229 gaattccttcttttcatattcttatttgggaatttcttctctaggagagatatatgcatg 288
Query: 89 taaagtctgtctacctctccttacagtttcccactggggaactggagtacagttttacct 148
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 taaagtctgactacctctccttacagtttcccactggggaactggagtacagttttacct 348
Query: 149 aagttcctgctgggaaattgctga-aaaatgctgagaggagcttgttggactgactttca 207
|||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct: 349 aagttcctgctgggaaattgctgagaaactgttgagaggagcttgttggactgactttca 408
Query: 208 gatcttgagtgaggggttgctcacaggagcatggctgaccccaaagcagctgcaatggaa 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gatcttgagtgaggggttgctcacaggagcatggctgaccccaaagcagctgcaatggaa 468
Query: 268 atttttacccagcatggatggtggtatccccataactgcctatcagctaacctccctaag 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atttttacccagcatggatggtggtatccccataactgcctatcagctaacctccctaag 528
Query: 328 ctaacctcct 337
||||||||||
Sbjct: 529 ctaacctcct 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_p05.g1 MSMg01no074_p05.g1 CHROMAT_FILE:
MSMg01no074_p05.g1 PHD_FILE: MSMg01no074_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:29 2005
(425 letters)
>mm_chr16_12214515_12215339
Length = 825
Score = 806 bits (417), Expect = 0.0
Identities = 423/425 (99%)
Strand = Plus / Minus
Query: 1 tctatgttcaaaaactagaggaaatattgggcatcacaagtggagaagtaaagatacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctatgttcaaaaactagaggaaatattgggcatcacaagtggagaagtaaagatacaga 566
Query: 61 aaaagctcaagccaggattaaaacctgcaacacacaaaataatcatgtacactgaactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaagctcaagccaggattaaaacctgcaacacacaaaataatcatgtacactgaactgg 506
Query: 121 cttcaaagattctaagatgaaaatactggggaaagtaaatactggtgatctgaaaaccag 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 505 cttcaaagattctaagatgaaaatactggtgaaagtaaatactggtgatctgaaaaccag 446
Query: 181 agtaatagaatcaattaaaatgaaccaatgaggggctgaggaagtggcctgagcatgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtaatagaatcaattaaaatgaaccaatgaggggctgaggaagtggcctgagcatgagt 386
Query: 241 ctcttgcctggtgggcttagtcccaagtattggatggatttttatgacattgactcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ctcttgcctggtgggcttagtcccaagtattggatggatttttatgacattgattcattt 326
Query: 301 atttactgtgtgcactcagaacccacctagaagagacagcttctctcattctaccagtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttactgtgtgcactcagaacccacctagaagagacagcttctctcattctaccagtgg 266
Query: 361 gtttaggaggaacaagcccaggtcattacacatgtggcaagtaccttcacctttttatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtttaggaggaacaagcccaggtcattacacatgtggcaagtaccttcacctttttatcc 206
Query: 421 ctctt 425
|||||
Sbjct: 205 ctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
