Query= MSMg01no075_d15.b1 MSMg01no075_d15.b1 CHROMAT_FILE:
MSMg01no075_d15.b1 PHD_FILE: MSMg01no075_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:50 2005
(274 letters)
>mm_chr16_16897639_16898312
Length = 674
Score = 458 bits (237), Expect = e-133
Identities = 261/271 (96%), Gaps = 6/271 (2%)
Strand = Plus / Plus
Query: 5 gaattcctctgt--taccg-tgactgaagccagtcttttcttgaagactgtctttgctac 61
|||||||||||| | | || |||||||||||||||||| ||||||||||||||||||
Sbjct: 205 gaattcctctgtgat---gttgcctgaagccagtcttttctggaagactgtctttgctac 261
Query: 62 ccagtgtactaagggagagttttcatttcctgtgtgatccccccagacctcaggctgctt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccagtgtactaagggagagttttcatttcctgtgtgatccccccagacctcaggctgctt 321
Query: 122 acctcactctagtggccatgcaggcctgctgagcacaaacggccaggacactgaccacat 181
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 322 acctcactctagtggccatgcaggcctgctgagcacaaacagccaggacactgaccacat 381
Query: 182 ggagcttaggatccctttcaaaagaaaaatggctgcacaataatatggctgcacagaaca 241
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 382 ggagcttaggatccctttcaaaagaaaaatggcagcacaataatatggctgcacagaaca 441
Query: 242 gcccatgaaagatagtggggggggggggtgt 272
|||||||||||||||||||||||||||||||
Sbjct: 442 gcccatgaaagatagtggggggggggggtgt 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no075_d15.g1 MSMg01no075_d15.g1 CHROMAT_FILE:
MSMg01no075_d15.g1 PHD_FILE: MSMg01no075_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:50 2005
(244 letters)
>mm_chr16_17077756_17078399
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 ttcacagagattgcctctgcctcccaactggtcggagtaaaggcgcatgtacgtacgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttcacagagattgcctctgcctcccaactggtcggagtaaaggcgcatgtacgtacgcca 430
Query: 61 gccttctttttatcaggtttgagtccagatcacttgccttggagataagctcatcgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gccttctttttatcaggtttgagtccagatcacttgccttggagataagctcatcgtgat 370
Query: 121 tggccagatgggctctgcagtggatgcagctgtaagttcggtgacagtgtggcagataag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tggccagatgggctctgcagtggatgcagctgtaagttcggtgacagtgtggcagataag 310
Query: 181 cttggaaagttttggacttggtcattttcaccatgtctgctgggctctcgtcactcggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cttggaaagttttggacttggtcattttcaccatgtctgctgggctctcgtcactcggtt 250
Query: 241 ctgg 244
||||
Sbjct: 249 ctgg 246
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
