Query= MSMg01no076_h01.b1 MSMg01no076_h01.b1 CHROMAT_FILE:
MSMg01no076_h01.b1 PHD_FILE: MSMg01no076_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:25 2005
(538 letters)
>mm_chr16_75776570_75777507
Length = 938
Score = 1009 bits (522), Expect = 0.0
Identities = 531/534 (99%)
Strand = Plus / Plus
Query: 5 gaattccttttgttctccttctttgtgtttccgaagattcctttttacttccttggaaag 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttttggtgtccttctttgtgtttccgaagattcctttttacttccttggaaag 264
Query: 65 tttcttccgtctctcaagagcttagcattcaatgtagctggactttatgtgtgtcattat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttcttccgtctctcaagagcttagcattcaatgtagctggactttatgtgtgtcattat 324
Query: 125 tttctcaataagagtctttattatatctgagacatattttttacaagtgtaagttctcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttctcaataagagtctttattatatctgagacatattttttacaagtgtaagttctcca 384
Query: 185 gatatcttttgcttaaaactcagtcggatgtagagtaatgaaactaactgatgatctgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatatcttttgcttaaaactcagtcggatgtagagtaatgaaactaactgatgatctgtg 444
Query: 245 aaatgtcagttcttatttatgggttagggtctgtaggtaaggggagaggctttacgtcct 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 aaatgtcagttcttatttatgggttagggtctgtaggtagggggagaggctttacgtcct 504
Query: 305 gccattaaagtcaaccaacttcgcttctatgtattgctcattattgtagaagtcatatag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gccattaaagtcaaccaacttcgcttctatgtattgctcattattgtagaagtcatatag 564
Query: 365 gattgtacagtgggatagctagaagccttgacttcattcttagttatttagaaactatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gattgtacagtgggatagctagaagccttgacttcattcttagttatttagaaactatct 624
Query: 425 ctcagagattgcttgatatccaaataggaatagtctcatcaataatagtgaaactcatgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctcagagattgcttgatatccaaataggaatagtctcatcaataatagtgaaactcatgc 684
Query: 485 gaattaaagtcaactttgaaaactgatgtcaatggtttatatgaagaactataa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaattaaagtcaactttgaaaactgatgtcaatggtttatatgaagaactataa 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_h01.g1 MSMg01no076_h01.g1 CHROMAT_FILE:
MSMg01no076_h01.g1 PHD_FILE: MSMg01no076_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:25 2005
(355 letters)
>mm_chr16_75931658_75932413
Length = 756
Score = 642 bits (332), Expect = 0.0
Identities = 350/356 (98%), Gaps = 1/356 (0%)
Strand = Plus / Minus
Query: 1 attaatgacttgatgtatcccagcttctgggttttgttttgttgagtggaaaaaactgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 attaatgacttgatgtatcccagcttctgggttttgttttgttgagtggaaaaaactgaa 497
Query: 61 caagaacattgtacctattaaaactcatgtgttttcttagactgt-ggggtcacagagat 119
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 496 caagaacatggtacctattaaaactcatgtgttttcttagactgtgggggtcacagagat 437
Query: 120 gactaagacagctactattacaggtgcaccatttgcaacttttaaccacttgggatccca 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gactaagacagctaatattacaggtgcaccatttgcaacttttaaccacttgggatccca 377
Query: 180 attgatactgaatgcacattgctgggttttcctagttttcaagattcgttccttcacttt 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 attgagactgaatgcacattgctgggttttcctagttttcaagattcgttccttcacttt 317
Query: 240 acctaattttctcaggagagatacagatagaatgacctccctataaacattcagagtaaa 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 316 acctaattttctcaggagagatacagatagaatgacctccctataaatattcagagtaaa 257
Query: 300 tatctaataaggtttgcttttgccttcccagagtgctccagcggctttatgcctac 355
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 256 tatctaataaggtttgcttttgccttcccagagtgctccagtggctttatgcctac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 756
Length adjustment: 9
Effective length of query: 346
Effective length of database: 747
Effective search space: 258462
Effective search space used: 258462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
