Query= MSMg01no079_o05.b1 MSMg01no079_o05.b1 CHROMAT_FILE:
MSMg01no079_o05.b1 PHD_FILE: MSMg01no079_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:38 2005
(603 letters)
>mm_chr16_92946394_92947396
Length = 1003
Score = 1120 bits (579), Expect = 0.0
Identities = 594/599 (99%)
Strand = Plus / Minus
Query: 5 gaattccagacccccaagaggaagcccagtgttcagcatccgggatcttgtgtttccact 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 936 gaattccagacccccaagaggaagcccagtgttcagcatccaggatcttgtgtttccact 877
Query: 65 tggcttatgcatagccaaccattcttcttagttagaaacaaatgaaaacactgtgaaatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 tggcttatgcatagccaaccattcttcttagttagaaacaaatgaaaacactgtgaaatc 817
Query: 125 taaatcttcaggcttgcaaatggaggcaaagatgcagcttttccaagaaggcctccactt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 816 taaatcttcaggcttgcaaatggaggcaaagatgcagcttttccaagaaggcctccacct 757
Query: 185 gagcctctctggacaagccttcaggatcctagccagggtgctgagctgtatctgtgtcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gagcctctctggacaagccttcaggatcctagccagggtgctgagctgtatctgtgtcta 697
Query: 245 gagaacaataggcatccatgagatggtgtatgcagtagggtgaaccggatctcctccagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gagaacaataggcatccatgagatggtgtatgcagtagggtgaaccggatctcctccagt 637
Query: 305 ggtctcactgcagtaggatgggcatggtttcctctggtgagatgggtggagtctcctcct 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggtctcactgcagtaggatgggcgtggtttcctctggtgagatgggtggagtctcctcct 577
Query: 365 gtggcctcactgctatatcttctcctttctgtacacacgtgtctcatcagctcattgtct 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gtggcctcactgctatgtcttctcctttctgtacacacgtgtctcatcagctcattgtct 517
Query: 425 ccctatactttggaatgttctagattcccaacatcagcactacagggctggcatctttat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccctatactttggaatgttctagattcccaacatcagcactacagggctggcatctttat 457
Query: 485 tcagacctgagcatctcctgacagagccttcccatcactcggccacatgttctaagttta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcagacctgagcatctcctgacagagccttcccatcactcggccacatgttctaagttta 397
Query: 545 atacagtggcagtctccacagtggctagggtccttatccatccatttctattttcagac 603
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 attcagtggcagtctccacagtggctagggtccttatccatccatttctattttcagac 338
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_o05.g1 MSMg01no079_o05.g1 CHROMAT_FILE:
MSMg01no079_o05.g1 PHD_FILE: MSMg01no079_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:38 2005
(599 letters)
>mm_chr16_92778776_92779775
Length = 1000
Score = 1013 bits (524), Expect = 0.0
Identities = 567/598 (94%), Gaps = 27/598 (4%)
Strand = Plus / Plus
Query: 3 ttaaacccatc-caaagaaaaggtcaaacaaacaagtaacaaatgaacaaggtttcttgg 61
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttaaacccatcacaaagaaaaggtcaaacaaacaagtaacaaatgaacaaggtttcttgg 262
Query: 62 cggggcctggaaggtgctgtgctgtggatgggcttggtccatgaggcagagccccaagga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cggggcctggaaggtgctgtgctgtggatgggcttggtccatgaggcagagccccaagga 322
Query: 122 gcaccactagattcaggggtggccctgaagtcacagaccagggtttggattcagttgaga 181
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 323 gcaccactagattcaggggtggccctgaagtcacagaccagggtttggattccgttgaga 382
Query: 182 tgggatgagatgatttttgctggccccttcttctgctctggcaggagtttcccagtgtgc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgggatgagatgatttttgctggccccttcttctgctctggcaggagtttcccagtgtgc 442
Query: 242 tccaggaactactggtcatgacttgactggaattctctaaggaggagcagtggagcacag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccaggaactactggtcatgacttgactggaattctctaaggaggagcagtggagcacag 502
Query: 302 gcaagcaaaggagatccctgactgaggctggtctccagtcaccctggaattccaccgact 361
||||||||||||||||||||||||||||||| |||
Sbjct: 503 gcaagcaaaggagatccctgactgaggctgg--------------------------act 536
Query: 362 cctgctggtccaggtccactctgctgagcactgtgatatcacctactgcttttagagtct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cctgctggtccaggtccactctgctgagcactgtgatatcacctactgcttttagagtct 596
Query: 422 tcctgaacctggctttgggacttctcctttcctccccagctactaaactccttctgccta 481
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tcctgaacctgtctttgggacttctcctttcctccccagctactaaactccttctgccta 656
Query: 482 ggcccctgggtcctactgatgagggaccacctgcaccaagagactgtgacctgtagtttg 541
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 657 ggcccctgggtcctactgatgagtgaccacctgcaccaagagactgtgacctgttgtttg 716
Query: 542 tgatttctacagaggacaaatttcctacttctccctgggctgtagagctaagaaatgg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgatttctacagaggacaaatttcctacttctccctgggctgtagagctaagaaatgg 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
