Query= MSMg01no080_a09.b1 MSMg01no080_a09.b1 CHROMAT_FILE:
MSMg01no080_a09.b1 PHD_FILE: MSMg01no080_a09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:48 2005
(637 letters)
>mm_chr16_21461537_21462573
Length = 1037
Score = 1036 bits (536), Expect = 0.0
Identities = 571/592 (96%), Gaps = 15/592 (2%)
Strand = Plus / Plus
Query: 61 gcatgtgttttcttaggctcattcactgctcctgggatgtaccaccgataggcagactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcatgtgttttcttaggctcattcactgctcctgggatgtaccaccgataggcagactgg 305
Query: 121 tatatgcaattcagtgtcttagaacacagtgagacagctgtgctgaggcagggccatgcc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 306 tatatgcaattcagtgtcttagaacacagtgagacagctgtgccgaggcagggccatgcc 365
Query: 181 cactgtgtgctgctttgacaccctgagttggcataccccactgtaaagtcaccatggatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cactgtgtgctgctttgacaccctgagttggcataccccactgtaaagtcaccatggatt 425
Query: 241 ggtactacccatgcttcctatggtttctgactctgacatctgtcactttagaagatgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggtactacccatgcttcctatggtttctgactctgacatctgtcactttagaagatgtta 485
Query: 301 ttattcagggagtacagatggtcctaagggtttgtgcttctgtggatatgagcagccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttattcagggagtacagatggtcctaagggtttgtgcttctgtggatatgagcagccaca 545
Query: 361 ctgtacagatatgttagcttattattactttctaaatgaggcggcatagcacatgtttgt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ctgtacagatatgttagcttattattactttctaaatgaggcggcatagcacatgtttgc 605
Query: 421 gtagtacttacactgaattgttaactgttaaagagacaatttaaagtacatgggagaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtagtacttacactgaattgttaactgttaaagagacaatttaaagtacatgggagaatg 665
Query: 481 ttcataggtt---------------gccactgaaatcaagaattaagcctggaataagtc 525
|||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 666 ttcataggttatatgcaaatatgttgccactgaaatcaagagttaagcctggaataagtc 725
Query: 526 cctgtggatatcccagttggccttttcttttgttcctggtgttgtttgtaagagagttgg 585
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 726 cctgtggatatcccagttggccttttcttttgttcctgatgttgtttgtaagagagttgg 785
Query: 586 catcttctttggaaggggatgaatgcccttgtcctagtcgcttttgtattgc 637
||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 786 catcttctttggaaggggatgaatgccattgtcctagttgcttttgtattgc 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_a09.g1 MSMg01no080_a09.g1 CHROMAT_FILE:
MSMg01no080_a09.g1 PHD_FILE: MSMg01no080_a09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:48 2005
(439 letters)
>mm_chr16_21597029_21597867
Length = 839
Score = 696 bits (360), Expect = 0.0
Identities = 372/376 (98%)
Strand = Plus / Minus
Query: 64 gcactcctgatttctaatacaagtgcagccctgctggttttattcagactttaacccttc 123
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 639 gcactcctgatttctaatacaagtgcaaccctgctggttttattcagactttaacccttc 580
Query: 124 agctgccgtactgagggtcacttttctgcagtgtttgagaggtcactgagatacacgcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 579 agctgccgtactgagggtcacttttctgcagtgtttgagaggtcactgagatacatgcaa 520
Query: 184 tgtgcttcgtgtctgccaacactaagagggcattggcaatacagtgaggcatctcatgtt 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 519 tgtgcttcgtgtctgccaacactaagagggcattggcaatacagtggggcatctcatgtt 460
Query: 244 agagacaccaaagaggacacaattagtcttgtcattttcttcatggtttatgatggagat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 agagacaccaaagaggacacaattagtcttgtcattttcttcatggtttatgatggagat 400
Query: 304 gcctccctctacaaatctctgtggtttctttatattcaagcaaggacaagagaaaaacca 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ccctccctctacaaatctctgtggtttctttatattcaagcaaggacaagagaaaaacca 340
Query: 364 caaagaaggaatcctgcctgtgttagatttctgttttgtttgctctttctcctcccttct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caaagaaggaatcctgcctgtgttagatttctgttttgtttgctctttctcctcccttct 280
Query: 424 tgttttctctggcaat 439
||||||||||||||||
Sbjct: 279 tgttttctctggcaat 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
