Query= MSMg01no081_p12.b1 MSMg01no081_p12.b1 CHROMAT_FILE:
MSMg01no081_p12.b1 PHD_FILE: MSMg01no081_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:20 2005
(477 letters)
>mm_chr16_14614100_14614975
Length = 876
Score = 888 bits (459), Expect = 0.0
Identities = 474/481 (98%), Gaps = 5/481 (1%)
Strand = Plus / Plus
Query: 1 gagatttcttcaacattatggattttcagttacctataaggagttgaatcgagtcgtgct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 gagatttcttcaacattatggattttcagttacctataaggagttgaatcgagt-gtgct 259
Query: 61 ttgagtgtgtatacatgtttccttttatatatgagacacatatgtccatctgcttgctaa 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcgagtgtgtatacatgtttccttttatatatgagacacatatgtccatctgcttgctaa 319
Query: 121 agatccaatttgtgctgttgcttctaattaaaagtttttgaaataatgatacaattacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agatccaatttgtgctgttgcttctaattaaaagtttttgaaataatgatacaattacat 379
Query: 181 cattatttccctttccttttctccaagcaactcctcccatcagacccctttgctatcaaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 cattatttccctttccttttctccaagtaactcctcccatcagacccctttgctatcaaa 439
Query: 241 tccatagcctctttttctttagttgttaaatacttatatggtacatacatacatacatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tccatagcctctttttctttagttgttaaatacttatatggtacatacatacatacatac 499
Query: 301 a----cattctgaagtacataaatacaacatactcaattaggataattttacgtgtacat 356
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atacacattctgaagtacataaatacaacatactcaattaggataattttacgtgtacat 559
Query: 357 atatgatctcagggatggccactagtattagataatttcatttggagaggctcttcccta 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atatgatctcagggatggccactagtattagataatttcatttggagaggctcttcccta 619
Query: 417 ggaaagatgagttctccccctcttggcagtccctatttgctcatagttcttcatatagag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggaaagatgagttctccccctcttggcagtccctatttgctcatagttcttcatatagag 679
Query: 477 t 477
|
Sbjct: 680 t 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_p12.g1 MSMg01no081_p12.g1 CHROMAT_FILE:
MSMg01no081_p12.g1 PHD_FILE: MSMg01no081_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:20 2005
(243 letters)
>mm_chr16_14778118_14778761
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Minus
Query: 1 tctctcctctatctgagaag-agtacaagttggaaaacaagaaaagaagaagagtatttc 59
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctctcctctatctgagaagcagtacaagttggaaaacaagaaaagaagaagagtatttc 385
Query: 60 ctctggtgtcttattggagcaagggagatatcatcaaatagattttcagagacatggagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctctggtgtcttattggagcaagggagatatcatcaaatagattttcagagacatggagt 325
Query: 120 gaaattccggaaggaaccatcttactaaggaattccatctatgtacatgtcagcctctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaaattccggaaggaaccatcttactaaggaattccatctatgtacatgtcagcctctct 265
Query: 180 gaatgaagaggcttatgcaaatggaccgcactgaaagcaaagactcacaacccatcagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 264 gaatgaagaggcttatgcaaatggaccgcactgaaagcaaagactcacaactcatcagaa 205
Query: 240 tgca 243
||||
Sbjct: 204 tgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
