Query= MSMg01no082_p14.b1 MSMg01no082_p14.b1 CHROMAT_FILE:
MSMg01no082_p14.b1 PHD_FILE: MSMg01no082_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:34 2005
(541 letters)
>mm_chr16_82259568_82260508
Length = 941
Score = 1023 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Plus
Query: 1 aatccaataccgttttctattttccttgagtacatagaaatacaggcaaacataacactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatccaataccgttttctattttccttgagtacatagaaatacaggcaaacataacactc 260
Query: 61 aaaacacataaaatgaattaaaaagataaagaaatgagtgtgtaacacagttattggatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacacataaaatgaattaaaaagataaagaaatgagtgtgtaacacagttattggatt 320
Query: 121 ataatccatcattttaaatttaaaaaaagttccactgacatggttttattttctctaaaa 180
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ataatccatcattttaaattttaaaaaagttccactgacacggttttattttctctaaaa 380
Query: 181 gtttcatgtttataatatcatatatttgaataaataattttatatctcttcttcaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtttcatgtttataatatcatatatttgaataaataattttatatctcttcttcaaacaa 440
Query: 241 ataatataattggcaattccatattattacaaataattattgaaatattccatcatggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatataattggcaattccatattattacaaataattattgaaatattccatcatggta 500
Query: 301 gcagtgtgtacatcagacaacacagaacttcctggagatggttatttccttccaaacata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcagtgtgtacatcagacaacacagaacttcctggagatggttatttccttccaaacata 560
Query: 361 tggttctctaggatttgtgtaggcaacaggttcctatacctgttggtccaacttcctggg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 tggttctctaggatttgtgtaggcaacaggttcctatacctgttggtccaacttcctgag 620
Query: 421 catcactcattcaggaaaatagtataatgaagaatacaattcggtaatgaacagctgtaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catcactcattcaggaaaatagtataatgaagaatacaattcggtaatgaacagctgtaa 680
Query: 481 gtacaagggtatacttttcagtaacttgcttttgttgtttcaggatttaatataaagcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtacaagggtatacttttcagtaacttgcttttgttgtttcaggatttaatataaagcaa 740
Query: 541 a 541
|
Sbjct: 741 a 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_p14.g1 MSMg01no082_p14.g1 CHROMAT_FILE:
MSMg01no082_p14.g1 PHD_FILE: MSMg01no082_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:34 2005
(594 letters)
>mm_chr16_82353233_82354224
Length = 992
Score = 1052 bits (544), Expect = 0.0
Identities = 581/594 (97%), Gaps = 2/594 (0%)
Strand = Plus / Minus
Query: 1 actttgaggaattcaatatttaaaatatcgagtgtaagatatgttgaccatacatgtata 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 792 actttgaggaattcaatatttaaaatatcgagtgtaagatatattgaccatacatgtata 733
Query: 61 aatggagaaaaatagagtatttgaaagactgaatataaattaaatgtataaatgtttaaa 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aatggagaaaaatagaatatttgaaagactgaatataaattaaatgtataaatgtttaaa 673
Query: 121 aagtataaatgaaaaggaaatttgcatacatataaagtatactatatttaatttagtata 180
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 672 aagtataaatgaaaaggaaatttgcatacatataaagtatactacatttaatttagtaca 613
Query: 181 aaattcattgtaaggatctcttcacacagttactatttatattcatgtgtacccttgtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 aaattcattgtaaggatctcttcacacagttactatttatattcatgtgtacccttgtag 553
Query: 241 gtttgttgaaaatgtattgttattgtatatatttagtttgtaaagcatattgttaatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtttgttgaaaatgtattgttattgtatatatttagtttgtaaagcatattgttaatttg 493
Query: 301 taattttcatattaatcatctcaaaagactttttatatcatatatatatatgcatatagt 360
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 492 taattttcatattaatcatctcaaaagactttttatatc--atatatatatgcatatagt 435
Query: 361 tttctttccctcaccccatctgttttgtttctttgctctattctatttgcctatcctcat 420
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 434 tttctttccctcaccgcatctgttttgtttctttgctctattctctttgcctatcctcat 375
Query: 421 taatcccctgcacttttgcattgtcaattcacacgatgagggatgtttttgtaattaccc 480
||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 374 taatcccctgcacttttccattgtcatttcacatgatgagggatgtttttgtaattaccc 315
Query: 481 tttataagaaggagtatatcaagttagagaggaggagtaactagtaggtgtgatcaagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttataagaaggagtatatcaagttagagaggaggagtaactagtaggtgtgatcaagtt 255
Query: 541 agagtgtatgcttatatgaaacatcaaaagaaaatctcagtacctattactggt 594
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 254 agagtgtatgcatatataaaacatcaaaagaaaatctcagtacctattactggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 992
Length adjustment: 10
Effective length of query: 584
Effective length of database: 982
Effective search space: 573488
Effective search space used: 573488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
