Query= MSMg01no086_b15.b1 MSMg01no086_b15.b1 CHROMAT_FILE:
MSMg01no086_b15.b1 PHD_FILE: MSMg01no086_b15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:42 2005
(230 letters)
>mm_chr16_91379712_91380342
Length = 631
Score = 246 bits (127), Expect = 1e-69
Identities = 133/135 (98%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 1 aaagcggaaacgagattca-caaacaagaatttagttagaagacgtcttgtgtacagtgg 59
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagtggaaacgagattcaacaaacaagaatttagttagaagacgtcttgtgtacagtgg 260
Query: 60 agcctcattttgcctggaacaaaacaaaggaaggaaatattcttggcccagaggagaaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcctcattttgcctggaacaaaacaaaggaaggaaatattcttggcccagaggagaaga 320
Query: 120 gtggtgtgtgtgtgt 134
|||||||||||||||
Sbjct: 321 gtggtgtgtgtgtgt 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 631
Length adjustment: 9
Effective length of query: 221
Effective length of database: 622
Effective search space: 137462
Effective search space used: 137462
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_b15.g1 MSMg01no086_b15.g1 CHROMAT_FILE:
MSMg01no086_b15.g1 PHD_FILE: MSMg01no086_b15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:42 2005
(290 letters)
>mm_chr16_91495113_91495802
Length = 690
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%)
Strand = Plus / Minus
Query: 1 aattctttcacctctatttctctcacatcaaacaggtaaaaacagaaacttactttgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aattctttcacctctatttctctcacatcaaacaggtaaaaacagaaacttactttgtca 430
Query: 61 ctggaagacttctgccagattcgtatggtgtaactgaaggaaggtttctccagtgcccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctggaagacttctgccagattcgtatggtgtaactgaaggaaggtttctccagtgcccac 370
Query: 121 atgttcccgtcttgtccgggaggagagatgtggactagtatggctttatcttcagcttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgttcccgtcttgtccgggaggagagatgtggactagtatggctttatcttcagcttct 310
Query: 181 aaacgtacttctggggggctcatgtgagctgttgacatcaaagaacaattacataactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaacgtacttctggggggctcatgtgagctgttgacatcaaagaacaattacataactac 250
Query: 241 agtagtatcattctttaatgttaataataaacaatgtttccctggtgta 289
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 249 agtagtatcattccaaaatgttaataataaacaatgtttccctggtgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
