Query= MSMg01no089_a17.b1 MSMg01no089_a17.b1 CHROMAT_FILE:
MSMg01no089_a17.b1 PHD_FILE: MSMg01no089_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:43 2005
(259 letters)
>mm_chr16_37704729_37705388
Length = 660
Score = 424 bits (219), Expect = e-123
Identities = 240/247 (97%), Gaps = 1/247 (0%)
Strand = Plus / Minus
Query: 14 gaattcctacctttac-cagccgccgcccctgaactatctcatacagctagtgagacaag 72
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaattcctaccaagacacagccgccgcccctgaactatctcatacagctagtgagacaag 401
Query: 73 tctactttgtcagacccagctaaatcctgctttctgcgtgactcatcacaaaagctgtca 132
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tctactttggcagagccagctaaatcctgctttctgcgtgactcatcacaaaagctgtca 341
Query: 133 ggacaatgaggaggaactagaagctacatattaaacaggacagatcggaagagtatttgt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ggacaatgaggaggaactagaagctacatattaaacaggacagatcggaagagtatttgt 281
Query: 193 tcacatattaattatatcagaaggaatacaacctctgatgatcagcaaacaatagtccta 252
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tcacgtattaattatatcagaaggaatacaacctctgatgatcagcaaacaatagtccta 221
Query: 253 acgttgt 259
|||||||
Sbjct: 220 acgttgt 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 660
Length adjustment: 9
Effective length of query: 250
Effective length of database: 651
Effective search space: 162750
Effective search space used: 162750
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_a17.g1 MSMg01no089_a17.g1 CHROMAT_FILE:
MSMg01no089_a17.g1 PHD_FILE: MSMg01no089_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:43 2005
(249 letters)
>mm_chr16_37579800_37580442
Length = 643
Score = 416 bits (215), Expect = e-121
Identities = 237/249 (95%), Gaps = 10/249 (4%)
Strand = Plus / Plus
Query: 1 tctgttacatctggcaggtgctaactcactcttagatagctttacatcctctgcctttgg 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tctgttacatctggcaggtgcta----actcttagatagctttacatcctctgcctttgg 256
Query: 61 ggaaaaaaagagacttccttaaagtggaacaaataattggtcaatgtttatatcaggtga 120
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ggaaaaaa--agacttccttaaagtggaacaaataattggtcaatgtttatatcaggtga 314
Query: 121 aagagaccagttcctggggaggtggagggagctctcagaaatgacctggggttaaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagagaccagttcctggggaggtggagggagctctcagaaatgacctggggttaaaaaaa 374
Query: 181 aaaaagaaaaaaaaaaaaggttgtgcaagaatttcgatgtaagcgcgttggactttctaa 240
| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 375 a----gaaaaaaaaaaaaggttgtgcaagaatttcgatgtaagcacattggactttctaa 430
Query: 241 ctagtttct 249
|||||||||
Sbjct: 431 ctagtttct 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 643
Length adjustment: 9
Effective length of query: 240
Effective length of database: 634
Effective search space: 152160
Effective search space used: 152160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
