Query= MSMg01no089_d17.b1 MSMg01no089_d17.b1 CHROMAT_FILE:
MSMg01no089_d17.b1 PHD_FILE: MSMg01no089_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:58 2005
(153 letters)
>mm_chr16_17337022_17337573
Length = 552
Score = 257 bits (133), Expect = 2e-73
Identities = 148/153 (96%), Gaps = 1/153 (0%)
Strand = Plus / Minus
Query: 1 agctatcagctcatcatgtttttccctgttcctgaattaacctagtgtctcattttcctt 60
||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 352 agctatcagctcatcgtgtttttccctgtccctgaattaacctagtgtcttattttcctt 293
Query: 61 cataaattaccacctcaatacagttctaagcgttgtctttctgtcctgtgagttctcctt 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 292 cataaattaccacctcaatacagttctaagcattgtctttctgtcctgtgagtt-tcctt 234
Query: 121 tgagaatcataaagctgcttcttacctttgaag 153
|||||||||||||||||||||||||||||||||
Sbjct: 233 tgagaatcataaagctgcttcttacctttgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 552
Length adjustment: 8
Effective length of query: 145
Effective length of database: 544
Effective search space: 78880
Effective search space used: 78880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no089_d17.g1 MSMg01no089_d17.g1 CHROMAT_FILE:
MSMg01no089_d17.g1 PHD_FILE: MSMg01no089_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:58 2005
(288 letters)
>mm_chr16_17200067_17200754
Length = 688
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%)
Strand = Plus / Plus
Query: 1 gtcatcaaattacaagaaaacagcatgcagtcacgaaatcttcctaacccgaaacccaca 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 201 gtcatcaaattacaagaaaacagcatgcagtcacgaaatcttcctaaactgaaacccaca 260
Query: 61 aggctgaagggacgacaacttttggggtttgaacacggaagtgattagcattcctttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggctgaagggacgacaacttttggggtttgaacacggaagtgattagcattcctttcct 320
Query: 121 gtaggtaaatgatggagtgtcacccgcagaacagataagggggtttgatcacaattgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtaggtaaatgatggagtgtcacccgcagaacagataagggggtttgatcacaattgttt 380
Query: 181 tgtgcccacttccactctagttttatcaaatgttctctctaggtttcagtgagcaaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgcccacttccactctagttttatcaaatgttctctctaggtttcagtgagcaaatgg 440
Query: 241 ctttcttttgtttccagtgactccatcaaccaaatacaaatttggtct 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttcttttgtttccagtgactccatcaaccaaatacaaatttggtct 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
