Query= MSMg01no090_i07.b1 MSMg01no090_i07.b1 CHROMAT_FILE:
MSMg01no090_i07.b1 PHD_FILE: MSMg01no090_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:42 2005
(309 letters)
>mm_chr16_28880762_28881471
Length = 710
Score = 561 bits (290), Expect = e-164
Identities = 302/306 (98%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 5 gaattctttactggctgccaattc-agcaaagaaactgttgctattagtctctggtgttt 63
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 510 gaattctttactggctgccaattcaagcaaagaaactgttgctatttgtctctggtgttt 451
Query: 64 ctctcggcagacagccgcccccctcaaaccccccctcccccagttcattcacattcctag 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 450 ctctcggcagacagccgcccccctcaaaccccccttcccccagttcattcacattcctag 391
Query: 124 cagagaccacatgagtacgtctgccccatagaacccatgcagtaggagccatcactgtcc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 390 cagagaccacatgagtacgtctgccccatagaacccatgcagtaggagccatcaatgtcc 331
Query: 184 ctgacttgggaagagaagatgggggaggtttgttccttccctggactagtttgaccttgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctgacttgggaagagaagatgggggaggtttgttccttccctggactagtttgaccttgt 271
Query: 244 tctgctttgatccttcccactgttggcagactgtgcccctgaccccaactgcagtgaatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tctgctttgatccttcccactgttggcagactgtgcccctgaccccaactgcagtgaatc 211
Query: 304 aatcct 309
||||||
Sbjct: 210 aatcct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 710
Length adjustment: 9
Effective length of query: 300
Effective length of database: 701
Effective search space: 210300
Effective search space used: 210300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no090_i07.g1 MSMg01no090_i07.g1 CHROMAT_FILE:
MSMg01no090_i07.g1 PHD_FILE: MSMg01no090_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:43:42 2005
(284 letters)
>mm_chr16_28794690_28795373
Length = 684
Score = 528 bits (273), Expect = e-154
Identities = 282/285 (98%), Gaps = 1/285 (0%)
Strand = Plus / Plus
Query: 1 aaaatagctacatacacatttttagataaaaaagatttcacataggaaactttaaaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaatagctacatacacatttttagataaaaaagatttcacataggaaactttaaaaccc 260
Query: 61 acaacaaaggcatatacagaaaaagaaaacagtgaactaaaagtagatgcagccaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacaaaggcatatacagaaaaagaaaacagtgaactaaaagtagatgcagccaagaaa 320
Query: 121 agactagaaaatagtatcccaaagctaattgtattttaaggtgttcaaagtgataaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agactagaaaatagtatcccaaagctaattgtattttaaggtgttcaaagtgataaatct 380
Query: 181 tagtgttcttgttttaagacagttgtactatggagt-ttggcctgcctggaacttgttct 239
|||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||
Sbjct: 381 tagtgttcttgttttaagacagttttactatgtagtattggcctgcctggaacttgttct 440
Query: 240 gtagacaaggctggccttgaacttacagccatccatctgccactg 284
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtagacaaggctggccttgaacttacagccatccatctgccactg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
