Query= MSMg01no091_a01.b1 MSMg01no091_a01.b1 CHROMAT_FILE:
MSMg01no091_a01.b1 PHD_FILE: MSMg01no091_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:21 2005
(430 letters)
>mm_chr16_43425759_43426588
Length = 830
Score = 775 bits (401), Expect = 0.0
Identities = 426/447 (95%), Gaps = 20/447 (4%)
Strand = Plus / Minus
Query: 4 ggaattcctccatcagatcgatgggagagtggacctctcttgactgctggtggatatggg 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggaattcctccatcagatagatgggagagtggacctctcttgactgctggtggatatggg 656
Query: 64 actgtgggcactgccagtcctgggcaggtttacataagaagggcagctgagcaaggcagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 actgtgggcactgccagtcctgggcaggtttacataagaagggcagctgagcaaggcagg 596
Query: 124 gtgaaacaaaccagtcagcagcaagcatccatggagtcagttcctgctgggtttcaatgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gtgaaacaaaccagtcagcagcaagcatccatggagtcagttcctgctgggtttcaatgc 536
Query: 184 tgagctataagctcatattaactcttactccacaagatgctttgggtcagtgtttaatca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tgagctataagctcatattaactcttactccacaagatgctttgggtcagtgtttaatca 476
Query: 244 tagcaacagggattcaaactagggtaactgtaaaacttttagctaatatgagctctctta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tagcaacagggattcaaactagggtaactgtaaaacttttagctaatatgagctctctta 416
Query: 304 ggaaataagctgtatacagcatgaataacaaacaaacaa--------------------g 343
||||||||||||||||||||||||||||||||||||||| |
Sbjct: 415 ggaaataagctgtatacagcatgaataacaaacaaacaaacaaacaaacaaacaaacaag 356
Query: 344 caaacctacagctttctaaaccaaagacttctattctctaaacttattctaatatggatt 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 caaacctacagctttctaaaccaaagacttctattctctaaacttattctaatatggatt 296
Query: 404 aacctaggatatacttttaagactaaa 430
|||||||||||||||||||||||||||
Sbjct: 295 aacctaggatatacttttaagactaaa 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_a01.g1 MSMg01no091_a01.g1 CHROMAT_FILE:
MSMg01no091_a01.g1 PHD_FILE: MSMg01no091_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:21 2005
(453 letters)
>mm_chr16_43272040_43272892
Length = 853
Score = 876 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Plus
Query: 1 ccttgcattatatttgtctatctcacttaccttaagcataggtcagtgtctccatgcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgcattatatttgtctatctcacttaccttaagcataggtcagtgtctccatgcaca 260
Query: 61 gtattgtttattcagtagcttctgtcagagatcccagaggtttttggtacaggataaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtattgtttattcagtagcttctgtcagagatcccagaggtttttggtacaggataaatg 320
Query: 121 aatgtcaaatgagtaagtgctcaaaatatggagttttttccttgttctctttttcaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtcaaatgagtaagtgctcaaaatatggagttttttccttgttctctttttcaatat 380
Query: 181 taatttgaattttatgctttatatatgtcatttaaaatttttttaacatctcttcttcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatttgaattttatgctttatatatgtcatttaaaatttttttaacatctcttcttcct 440
Query: 241 tgatcttctccaaaaactaccaaataaaacctttgcatttgtagcctctgccactctctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgatcttctccaaaaactaccaaataaaacctttgcatttgtagcctctgccactctctg 500
Query: 301 agcttgcatattcctatggaatctaagggtcgtcttcctcctccctcagcactggaggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agcttgcatattcctatggaatctaagggtcgtcttcctcctccctcagcactggaggga 560
Query: 361 taacaccttagctatcaaaaaagatatgagacctgttgaaaggaaaagatgagttatgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacaccttagctatcaaaaaagatatgagacctgttgaaaggaaaagatgagttatgtt 620
Query: 421 gaaacatcttataagttataaaagcttcacaaa 453
|||||||||||||||||||||||||||||||||
Sbjct: 621 gaaacatcttataagttataaaagcttcacaaa 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
